Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20oligandrum_20[genbank_20GCA_5F002073175.1_202017-03-28] 340 sequences; 36,794,057 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq296 120 3e-22 seq235 102 7e-17 >seq296 Length=213998 Score = 120 bits (132), Expect = 3e-22 Identities = 175/245 (71%), Gaps = 2/245 (1%) Strand=Plus/Minus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCA- 24761 ||||||||||||| | || || || || || || || || |||||||| || | ||||| Sbjct 98529 GATGCAGATCTTTGTGAAGACTCTGACGGGCAAGACCATCACGCTCGATGTCG-AGCCAT 98471 Query 24762 CCGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATC 24821 | |||| | || | || || || |||||||| ||||| |||||||| || || || | Sbjct 98470 CGGACAGCATTGACAACGTCAAGCAGAAGATCCAGGACAAGGAAGGAATTCCACCAGACC 98411 Query 24822 AACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATA 24881 | || ||| ||||||| ||||| || ||||| ||||| | | | || || || | Sbjct 98410 AGCAGCGTCTGATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACGCTCTCGGACTACA 98351 Query 24882 ACATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGCGGAACTGAGC 24941 |||| || ||||| ||||| | ||||||||| | || | || || || | | || | Sbjct 98350 ACATCCAGAAGGAGTCGACCTTGCACTTGGTGCTCCGTCTTCGTGGTGGTGCCATCGAAC 98291 Query 24942 CAACG 24946 ||||| Sbjct 98290 CAACG 98286 >seq235 Length=453453 Score = 102 bits (112), Expect = 7e-17 Identities = 116/156 (74%), Gaps = 0/156 (0%) Strand=Plus/Minus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 |||||||||||| | || || || ||||| || || |||||| | || || || | | Sbjct 11334 GATGCAGATCTTCGTCAAGACACTCACCGGCAAGACCATTACGTTGGACGTCGAGCCTTC 11275 Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 ||| | | || | || || || |||||||| ||||| ||||| || ||||| ||||| Sbjct 11274 GGACTCGATTGACAACGTCAAGCAGAAGATCCAGGACAAGGAAGGCATTCCTCCAGATCA 11215 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGA 24858 || || ||||||||||| || || ||||| ||||| Sbjct 11214 GCAGCGATTGATCTTTGCTGGTAAGCAGCTCGAGGA 11179 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449895687935200