Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20oligandrum_20[genbank_20GCA_5F002073175.1_202017-03-28] 340 sequences; 36,794,057 total letters Query= NC_023639.1 Length=1168989 Score E Sequences producing significant alignments: (Bits) Value seq306 113 3e-19 >seq306 Length=154994 Score = 113 bits (124), Expect = 3e-19 Identities = 315/481 (65%), Gaps = 7/481 (1%) Strand=Plus/Plus Query 282020 TCAATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGCA 282079 |||| ||||| |||| || |||| |||| | |||| ||| || || || | Sbjct 87501 TCAACGCCTTCAAACAGCGAGTCAATCTCAAGATACGCCTGAGCCGAGGACGAGAGCGTG 87560 Query 282080 CGTTTAGCACGTTCACATGCTGTCCTTAGTCTTCGTAAGGCTTTTGCTGATTGAT--TCA 282137 ||||| ||||| |||||||| || | | | || |||||| ||||| || | ||| Sbjct 87561 CGTTTGGCACGCTCACATGCCGTGCGCAAGCGACGCAAGGCTC--GCTGACTGCTCGTCA 87618 Query 282138 AATCTGTTTTATATTTTCTCTTGAAATCTTCAACACACCATGTTACAAGACGATTATCAA 282197 || | || || | |||||| || | || | | ||||||||||| |||| Sbjct 87619 TGTCCTTGCGGTACTTGCGCTTGAACTCGTTGACGAAATACTCCACAAGACGATTGTCAA 87678 Query 282198 AATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCTT 282257 | ||||| || || | | || | ||||| ||| || | |||| ||||| || |||| Sbjct 87679 AGTCTTCTCCACCAAGATGCGTGTCTCCTGCCGTTGCCTTGACTTCGAAAATGCCCTCTT 87738 Query 282258 CAAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCA 282317 | | | || ||| | || || || |||||||| | |||||| || || |||| Sbjct 87739 CGATCGTCAGCAGACTCACGTCGAACGTCCCACCACCAAGATCAAAGATGAGCACAT--- 87795 Query 282318 TTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAA 282377 | | | || || ||| |||||||| || | || || || || || ||||| | Sbjct 87796 GGTGCTCGCCTCCCTTGCGATCCAGACCATAGGCGATGGCTGCCGCGGTGGGCTCATTGA 87855 Query 282378 TAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTG 282437 | || | ||| ||||| | |||||||| || ||||| || || || || | || | Sbjct 87856 TTATACGCAACACATTCAAGCCAGCAATGGCCCCAGCATCCTTGGTCGCCTGCCGCTGCG 87915 Query 282438 AATCGTTAAAATATGCAGGAACAGTAATAACGGCATCTGTTACTTCTTTTCCAATATAAG 282497 | ||||| ||||| || || || ||||| || || | | || | || ||||| |||| Sbjct 87916 AGTCGTTGAAATACGCCGGCACGGTAATCACCGCGTTCTTGACCTGCTTGCCAATGTAAG 87975 Query 282498 C 282498 | Sbjct 87976 C 87976 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3740613707436840