Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20oligandrum_20[genbank_20GCA_5F002073175.1_202017-03-28] 340 sequences; 36,794,057 total letters Query= NC_026421.1 Length=182380 Score E Sequences producing significant alignments: (Bits) Value seq268 178 2e-39 >seq268 Length=430982 Score = 178 bits (196), Expect = 2e-39 Identities = 315/454 (69%), Gaps = 4/454 (1%) Strand=Plus/Minus Query 146878 AGCTTGGGGAAGGGTCGGGGGTTCCTGGCCAGCTGAATTTTCAGGGGCTCCACGTGGTTG 146937 ||| | ||||| || || || | | ||| ||| || || || ||||| | ||| || Sbjct 389255 AGCGTCGGGAACGGACGAGGAGTGCGTCCCAACTGGATCTTGAGCGGCTCGAGGTGATTC 389196 Query 146938 AGGTAGACGTGCGCGTCCCCCAGGGTGTGCACAAAGTCCCCCGGCTTAAGGCCGGTCACG 146997 | ||||| ||| || || || | | || || ||||| || | ||| || || | || Sbjct 389195 AAGTAGATGTGTGCATCACCAATGACATGGACGAAGTCACCGGCCTTGAGCCCAGCGACC 389136 Query 146998 TGGGCCACCATGTAGGTGAGCAGCGAGTAGCTGGCTATGTTGAAGGGGACCCCCAGGCCC 147057 || || | || ||| | || || ||| ||||| || || || || || || |||||| Sbjct 389135 TGAGCGATCAATCGGGTCAACAACGCGTAACTGGCGATATTAAACGGCACACCGAGGCCC 389076 Query 147058 ATGTCCCCCGACCTCTGGTACAGCTGGCACGAGAGCTCCCCGTCGGCCACGTAAAACTGG 147117 ||||| |||| | |||||||| |||||||||||||| || | || ||||| |||||| Sbjct 389075 ATGTCAGCCGATCGCTGGTACATTTGGCACGAGAGCTCGCCATTCGCGACGTAGAACTGG 389016 Query 147118 CACAGGATGTGGCACGGCGGCAGCGCCATGGCGGGCAGGTCCGCGGGGTTCCAGGCCGAG 147177 || | ||||||||||| || |||||||| | ||||| || || ||||| || || Sbjct 389015 CAGAACATGTGGCACGGAGGAAGCGCCATCTCCTTGAGGTCTGCTGGATTCCATGCAGAC 388956 Query 147178 ACCACCAGCCGCCTGCTCTCGGGGTTCCTCTTAATCTCTTCGATAACC-CACCTCAGCTG 147236 | | | |||| | | ||||| |||||| || | ||| ||| || | ||||| Sbjct 388955 AAGAGAATACGCCGGTCGTTCGGGTTGGTCTTAAGCTTGTGGATGACCTCAGC-GAGCTG 388897 Query 147237 GTCCACGCCCTGGCCCCCGTAGTTTGTCCCGCA-GTCCACGTACCTGGCCCCAAAGTGCC 147295 ||||| ||||| || ||| | | | ||| || ||| |||| |||||||| | Sbjct 388896 ATCCACACCCTGACCGGTGTA-ATCGGCGTGCATATCGGTATACTTGGCACCAAAGTGAC 388838 Query 147296 TCCACTGGAAGCCGTACACTGGCCCCAGGTCGCC 147329 | |||||||||| |||||||| || || ||||| Sbjct 388837 GCAACTGGAAGCCATACACTGGACCGAGATCGCC 388804 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583485520176000