Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20oligandrum_20[genbank_20GCA_5F002073175.1_202017-03-28] 340 sequences; 36,794,057 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq296 105 7e-18 seq235 104 2e-17 >seq296 Length=213998 Score = 105 bits (116), Expect = 7e-18 Identities = 158/222 (71%), Gaps = 2/222 (1%) Strand=Plus/Plus Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGA 134555 || || | ||| | ||| | || || ||||| || ||||||||||| | ||| | Sbjct 98311 AGACGGAGCACCAAGTGCAAGGTCGACTCCTTCTGGATGTTGTAGTCCGAGAGCGTGCGG 98370 Query 134556 GAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCT 134615 ||| |||||||| ||||| || || |||| ||||||||| || || || || ||||| Sbjct 98371 CCGTCCTCGAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCTGGTGGAATTCCTTCC 98430 Query 134616 TTTTCTTGAATTTTTTGTTTGACCGCGTCCAATG-TGTCGGACGATTCCACGTCGAGAGT 134674 || || || || || || ||||| || ||||| |||| || | || || ||||| || Sbjct 98431 TTGTCCTGGATCTTCTGCTTGACGTTGT-CAATGCTGTCCGATGGCTCGACATCGAGCGT 98489 Query 134675 AATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTTT 134716 ||||| || || || | ||| || || || || ||||| || Sbjct 98490 GATGGTCTTGCCCGTCAGAGTCTTCACAAAGATCTGCATCTT 98531 >seq235 Length=453453 Score = 104 bits (114), Expect = 2e-17 Identities = 119/160 (74%), Gaps = 0/160 (0%) Strand=Plus/Plus Query 134558 GTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTT 134617 ||| |||||||| || || ||||| ||||| ||||||||||| || || |||||||| || Sbjct 11178 GTCCTCGAGCTGCTTACCAGCAAAGATCAATCGCTGCTGATCTGGAGGAATGCCTTCCTT 11237 Query 134618 TTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAAT 134677 || || || || || ||||| ||| | | ||| || | || ||||| | ||||| Sbjct 11238 GTCCTGGATCTTCTGCTTGACGTTGTCAATCGAGTCCGAAGGCTCGACGTCCAACGTAAT 11297 Query 134678 GGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTTTG 134717 ||| || ||||| | || || ||||| || ||||| ||| Sbjct 11298 GGTCTTGCCGGTGAGTGTCTTGACGAAGATCTGCATCTTG 11337 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505396252056800