Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20oligandrum_20[genbank_20GCA_5F002073175.1_202017-03-28] 340 sequences; 36,794,057 total letters Query= NC_028461.1 Length=127011 Score E Sequences producing significant alignments: (Bits) Value seq268 150 1e-31 >seq268 Length=430982 Score = 150 bits (166), Expect = 1e-31 Identities = 387/583 (66%), Gaps = 6/583 (1%) Strand=Plus/Minus Query 29871 TCTTCAGCGGTTCCACGTTATCCAGGTAGACGTGAGCGTCTCCCAGGTTGTGGACAAACT 29930 |||| ||||| || | || || || ||||| ||| || || || | | ||||| || | Sbjct 389218 TCTTGAGCGGCTCGAGGTGATTCAAGTAGATGTGTGCATCACCAATGACATGGACGAAGT 389159 Query 29931 CTCCCGGTTCTAGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGA 29990 | || | | ||||| | ||| ||||| |||| || | | | ||| ||||||| Sbjct 389158 CACCGGCCTTGAGCCCAGCGACCTGAGCGATCAATCGGGTCAACAACGCGTAACTGGCGA 389099 Query 29991 TGTTAAAGGGTACCCCGAGCCCCATGTCCCCCGACCTCTGGTAGAGCTGACACGAGAGCT 30050 | ||||| || || ||||| |||||||| |||| | |||||| | || |||||||||| Sbjct 389098 TATTAAACGGCACACCGAGGCCCATGTCAGCCGATCGCTGGTACATTTGGCACGAGAGCT 389039 Query 30051 CTCCGT-CGCTCACGTAAAACTGACACATGGCGTGGCACGGAGGAAGAGCCATGAGGCCC 30109 | || | ||| ||||| ||||| || | ||||||||||||||| ||||| Sbjct 389038 CGCCATTCGCG-ACGTAGAACTGGCAGAACATGTGGCACGGAGGAAGCGCCATCTCCTTG 388980 Query 30110 AAGTCTTTGGGGTTCCAGGCGCACACGATGATGCGCCTGTCTTCTGGGTTGTTCCTGATG 30169 | |||| || ||||| || ||| || || |||| ||| | |||||| || | | Sbjct 388979 AGGTCTGCTGGATTCCATGCAGACAAGAGAATACGCCGGTCGTTCGGGTTGGTCTTAAGC 388920 Query 30170 AGGTCCACGGCGTTTTGCAGCTGATCCACCCCCATCCCCGAGTAGTCTGCCCTCATGTCC 30229 || | | | | ||||||||||| ||| || | ||| || || ||| || Sbjct 388919 TTGTGGATGACCTCAGCGAGCTGATCCACACCCTGACCGGTGTAATCGGCGTGCATATCG 388860 Query 30230 GTGTACTCTGCTCCGAAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCT 30289 || |||| || || || || | | ||||||| || ||||| || || || || || || Sbjct 388859 GTATACTTGGCACCAAAGTGACGCAACTGGAAGCCATACACTGGACCGAGATCGCCTGCT 388800 Query 30290 TCCCTGTGCTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATC 30349 || | || ||| || | | | | | || | || || ||| ||||||| || Sbjct 388799 TCGCGATGACCGAGACCGATGCTTCCTAGGTATTCCTTCGATCCATTGCCGTCCCAAATA 388740 Query 30350 TTTACCCCCTTCTC--AGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCA 30407 | | |||| || ||||| || |||| || ||| || |||| |||||||| || Sbjct 388739 TGAATGTCCTTGTCCTGGAGAG-TC-TTGGCATTCGTGTCACCGCTGATGAACCACAACA 388682 Query 30408 GCTCCTCCACGACGGCCTTCCAAAAGACCCTCTTGGTCGTGAG 30450 |||| || | ||| | ||| || || | ||| |||||||| Sbjct 388681 GCTCTTCTGCAACGCCACGCCAGAACACGCGCTTCGTCGTGAG 388639 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406308716351280