Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20oligandrum_20[genbank_20GCA_5F002073175.1_202017-03-28] 340 sequences; 36,794,057 total letters Query= NC_028785.1 Length=72790 Score E Sequences producing significant alignments: (Bits) Value seq136 172 3e-38 >seq136 Length=619635 Score = 172 bits (190), Expect = 3e-38 Identities = 356/524 (68%), Gaps = 13/524 (2%) Strand=Plus/Minus Query 64190 GCGCAGAAGGCCGGTGGCAACGCCGCCTACATCGACGCTGAGCACTCCCTGGACCCTGAG 64249 || ||||| |||||||| | ||||| |||||||| |||||| || | ||| | | Sbjct 121860 GCCCAGAAAACCGGTGGCGTCTGCGCCTTTATCGACGCCGAGCACGCCATTGACGCCCAC 121801 Query 64250 TACGCCAAGGCGCTCGGTGTGGACCTCGACAACCTCGTGGTGGTTCAGCCGGACACTGGC 64309 | |||||| |||||||| || | ||| || | | ||||| ||| |||| Sbjct 121800 TGGGCCAAGCAACTCGGTGTCAACATTGACGACTTGTACATTTCCCAGCCAGACTCTGGT 121741 Query 64310 GAGCAGGCCCTGGAGATCGTTGACCTCCTCG--TCAAGTCTGGCGAGCTGTCCATCGTCG 64367 ||||||||||| |||||| || | | | || | || || | || |||| | Sbjct 121740 GAGCAGGCCCTCGAGATCACGGATA-CGTTGATTCGA-TCCGGTGCCGTGGATCTCGTGG 121683 Query 64368 TCGTTGACTCTGTGGCGGCCCTGGTGCCGCGCGCCGAGCTCGAAGGCGACATCGGGGACA 64427 |||| ||| ||| ||||| |||||||| || ||||||||||||||||| || |||||| Sbjct 121682 TCGTCGACAGTGTCGCGGCGCTGGTGCCACGGGCCGAGCTCGAAGGCGAGATGGGGGACC 121623 Query 64428 GTCACGTCGGCCTGCACGCGCGCCTCATGTCGCAGGCCATGCGCAAGCTCACCGGCACCA 64487 || ||| |||| || || |||||| ||||| ||||||||||||| ||| | Sbjct 121622 CCCAAATCGCGTTGCAAGCCCGTCTCATGAGTCAGGCGCTGCGCAAGCTCACGGGCTCGC 121563 Query 64488 TCTCCAGCACCAA---CACGCTGACGCTCTGGGTCAACCAGTTGCGCGAGAAGATCGGCA 64544 |||||| |||| || ||| | ||| |||| ||| | || ||||| |||| | Sbjct 121562 TCTCCAAGTCCAACTGCATGCTCA---TCTTCCTCAATCAGATCCGTCAGAAGGTCGGGA 121506 Query 64545 ACGTGGGCTACGGCCCGAACGAGACCACCACGGGCGGCAAGGCTTTGAGGTTCTACGCCT 64604 | | || ||| || ||| |||| |||| |||| ||| | | | |||||| | Sbjct 121505 TCAT---CTTTGGCTCGCCGGAGGTCACCTCGGGTGGCACGGCACTCCGTTACTACGCGT 121449 Query 64605 CAGTCCGCATGGATGTCCGTCGCATCGCCACCGAGAAGGAAGGCGATGAGGCTGTCGGCA 64664 | || || | ||| | ||||| | || | ||||||||||| ||| || |||| Sbjct 121448 CGGTGCGTCTCGATATTCGTCGTAAGGCGGCGATCAAGGAAGGCGACAAGGTCGTGGGCA 121389 Query 64665 ACCGCACCCGGGTGAAGGTCGTCAAGAACAAGCTGGCCCCGCCG 64708 | | ||| ||||||| |||||||||||||||| ||||| Sbjct 121388 ATGAGATTGTGGTCAAGGTCGCCAAGAACAAGCTGGCCTCGCCG 121345 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 232802235321740