Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20oligandrum_20[genbank_20GCA_5F002073175.1_202017-03-28] 340 sequences; 36,794,057 total letters Query= NC_028906.1 Length=75933 Score E Sequences producing significant alignments: (Bits) Value seq136 159 2e-34 >seq136 Length=619635 Score = 159 bits (176), Expect = 2e-34 Identities = 353/524 (67%), Gaps = 13/524 (2%) Strand=Plus/Minus Query 66596 GCGCAGAAGGCCGGTGGCAACGCCGCCTACATCGACGCTGAGCACTCCCTGGACCCTGAG 66655 || ||||| |||||||| | ||||| |||||||| |||||| || | ||| | | Sbjct 121860 GCCCAGAAAACCGGTGGCGTCTGCGCCTTTATCGACGCCGAGCACGCCATTGACGCCCAC 121801 Query 66656 TACGCCAAGGCGCTCGGTGTGGACCTCGACAACCTCGTGGTGGTTCAGCCCGATACCGGC 66715 | |||||| |||||||| || | ||| || | | ||||| || | || Sbjct 121800 TGGGCCAAGCAACTCGGTGTCAACATTGACGACTTGTACATTTCCCAGCCAGACTCTGGT 121741 Query 66716 GAGCAGGCCCTGGAGATCGTTGACCTCCTCG--TCAAGTCTGGCGAGCTGTCCATCGTCG 66773 ||||||||||| |||||| || | | | || | || || | || |||| | Sbjct 121740 GAGCAGGCCCTCGAGATCACGGATA-CGTTGATTCGA-TCCGGTGCCGTGGATCTCGTGG 121683 Query 66774 TCGTTGACTCCGTGGCGGCCCTGGTGCCGCGCGCCGAGCTCGAAGGCGACATCGGGGACA 66833 |||| ||| || ||||| |||||||| || ||||||||||||||||| || |||||| Sbjct 121682 TCGTCGACAGTGTCGCGGCGCTGGTGCCACGGGCCGAGCTCGAAGGCGAGATGGGGGACC 121623 Query 66834 GTCACGTCGGCCTGCACGCGCGCCTCATGTCACAGGCCATGCGCAAGCTCACTGGCACCA 66893 || ||| |||| || || |||||| ||||| ||||||||||||| ||| | Sbjct 121622 CCCAAATCGCGTTGCAAGCCCGTCTCATGAGTCAGGCGCTGCGCAAGCTCACGGGCTCGC 121563 Query 66894 TCTCCAGCACCAA---CACGCTGACGCTCTGGGTCAACCAGTTGCGCGAGAAGATCGGCA 66950 |||||| |||| || ||| | ||| |||| ||| | || ||||| |||| | Sbjct 121562 TCTCCAAGTCCAACTGCATGCTCA---TCTTCCTCAATCAGATCCGTCAGAAGGTCGGGA 121506 Query 66951 ACGTGGGCTACGGCCCGAATGAGACCACCACGGGCGGAAAGGCTTTGAGGTTCTACGCCT 67010 | | || ||| || ||| |||| |||| || | ||| | | | |||||| | Sbjct 121505 TCAT---CTTTGGCTCGCCGGAGGTCACCTCGGGTGGCACGGCACTCCGTTACTACGCGT 121449 Query 67011 CAGTCCGTATGGATGTCCGTCGCATCGCCACCGAGAAGGAAGGCGATGAGGCTGTCGGCA 67070 | || ||| | ||| | ||||| | || | ||||||||||| ||| || |||| Sbjct 121448 CGGTGCGTCTCGATATTCGTCGTAAGGCGGCGATCAAGGAAGGCGACAAGGTCGTGGGCA 121389 Query 67071 ACCGCACCCGGGTGAAGGTCGTCAAGAACAAGCTGGCCCCGCCG 67114 | | ||| ||||||| |||||||||||||||| ||||| Sbjct 121388 ATGAGATTGTGGTCAAGGTCGCCAAGAACAAGCTGGCCTCGCCG 121345 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 242859793645560