Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20oligandrum_20[genbank_20GCA_5F002073175.1_202017-03-28] 340 sequences; 36,794,057 total letters Query= NC_031058.1 Length=58566 Score E Sequences producing significant alignments: (Bits) Value seq275 89.7 2e-13 >seq275 Length=1119275 Score = 89.7 bits (98), Expect = 2e-13 Identities = 188/274 (69%), Gaps = 6/274 (2%) Strand=Plus/Plus Query 31005 CCATGCACATGTGTCGCGCCTTAATGACCACACCGACGCCCTTGGCTTCCAGGTGCTCGA 31064 ||||||||||||| |||| || ||||| | |||||||||| | | | | Sbjct 1109973 CCATGCACATGTGCGTGGCCTCGATCACCACGGCCACGCCCTTGGGCTGGATTACGCCCA 1110032 Query 31065 ACAGTGCGTCCGCGATCTGGTCTGTGAGCCGTTCCTGCACTTGCAGGCGGCGAGCATACA 31124 | |||| ||| ||||| | || || || ||||| ||||||| || || | | ||| Sbjct 1110033 TGATCGCGTTCGCAATCTGCTTGGTCAGGCGCTCCTGTACTTGCAATCGACGCGAAAACA 1110092 Query 31125 TGTCCGCCAGGCGGGACAGCTTGCTCAGGCCCACGATACGACCGTTCGGAATGTAGCTGA 31184 |||| | ||| | |||||||||| |||| | ||||| |||||||| | | Sbjct 1110093 CCTCCGAGATGCGCGCGAGCTTGCTCAAACCCAGCACTTTGCCGTTTGGAATGTACCCAA 1110152 Query 31185 TCGTG-ACCGTGCCGAAGATCGGCGCGAGGTGATGCTCGCA-ATGTGAGTAGATGGGGAT 31242 | ||| ||| |||| || ||| | | |||||||||||| ||| ||||||| | || Sbjct 1110153 T-GTGCACCTTGCCCGTGAAGGGCACCATGTGATGCTCGCACATG-GAGTAGAGGTCAAT 1110210 Query 31243 GTCGCGCACCGTCACCATCTGGTCATG--CTTCT 31274 ||||||||| | ||||| | ||| || ||||| Sbjct 1110211 GTCGCGCACGATGACCATTTCGTCGTGGTCTTCT 1110244 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 187288843818240