Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20oligandrum_20[genbank_20GCA_5F002073175.1_202017-03-28] 340 sequences; 36,794,057 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq296 138 3e-27 >seq296 Length=213998 Score = 138 bits (152), Expect = 3e-27 Identities = 163/219 (74%), Gaps = 4/219 (2%) Strand=Plus/Minus Query 177910 AGGTTAAAATGCTCCAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGG 177969 |||| || |||| | || || ||||| ||||| || || || || ||||| ||||| | Sbjct 98536 AGGTAAAGATGC---AGATCTTTGTGAAGACTCTGACGGGCAAGACCATCACGCTCGATG 98480 Query 177970 TGGAAAGCTCAGACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCC 178029 | || || |||| ||| || |||||||| || ||||| |||||||| |||||||| | Sbjct 98479 TCGAGCCATCGGACAGCATTGACAACGTCAAGCAGAAGATCCAGGACAAGGAAGGAATTC 98420 Query 178030 CTCCGGACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTG 178089 | || |||||||| || || ||||||||||| || |||||||| || || | || || Sbjct 98419 CACCAGACCAGCAGCGTCTGATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACGCTCT 98360 Query 178090 CCGATTATAACGTCCAAAAAGAATCAACACTGCATCTTG 178128 | || || ||| |||| || || || || |||| |||| Sbjct 98359 CGGACTACAACATCCAGAAGGAGTCGACCTTGCA-CTTG 98322 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203725956245960