Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20periplocum_20[genbank_20GCA_5F001922765.1_202016-12-28] 1,043 sequences; 35,886,464 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq272 201 1e-46 >seq272 Length=54113 Score = 201 bits (222), Expect = 1e-46 Identities = 409/601 (68%), Gaps = 6/601 (1%) Strand=Plus/Plus Query 145671 CAGCTGGAGCTTCAGGGGCTCCACGTGGTTGAGGTAGACGTGCGCGTCCCCCAGGACGTG 145730 || ||||| ||| || ||||| | |||||| | ||||| ||| || || || | ||| || Sbjct 10237 CAACTGGATCTTGAGCGGCTCGAGGTGGTTCAAGTAGATGTGTGCATCACCAATGACATG 10296 Query 145731 GATGAAGTCCCCGGGCTCGAGGCCCGTGAGGTGGGCGACCATGTAGGTCAGCAGGGAGTA 145790 || |||||| |||| || ||| || | || || |||| || ||||| || | ||| Sbjct 10297 GACGAAGTCACCGGCCTTGAGCCCAGCGACCTGAGCGATCAATCGGGTCAACAACGCGTA 10356 Query 145791 GCTGGCTATGTTGAAGGGCACCCCCAGCCCCATGTCCCCCGAGCGCTGGTACAGCTGGCA 145850 ||||| || || || ||||| || || |||||||| |||| |||||||||| ||||| Sbjct 10357 ACTGGCGATATTAAACGGCACACCGAGGCCCATGTCAGCCGATCGCTGGTACATTTGGCA 10416 Query 145851 GGAGAGCTCCCCGCCCGCCACGTAGAACTGGCACAGGAGGTGGCAGGGCGGCAGGGCCAT 145910 |||||||| || ||| |||||||||||||| | | |||||| || || || ||||| Sbjct 10417 CGAGAGCTCGCCATTCGCGACGTAGAACTGGCAGAACATGTGGCACGGAGGAAGCGCCAT 10476 Query 145911 GGCGGGCAGGTCCGCCGGGTTCCAGGCGGTGAGGACGAGCCTCCTGCTCTCGGGGTTCCT 145970 | ||||| || || ||||| || | | || | | || | | ||||| | Sbjct 10477 CTCCTTGAGGTCTGCTGGATTCCATGCAGACAAGAGAATACGCCGGTCGTTCGGGTTGGT 10536 Query 145971 CTTGATCTCCCCTATCAGGTCCCTGAGCTGGTCCACGCCCTGCCCCCGGTAATCTGTCTT 146030 ||| | || || | || |||||| ||||| ||||| || |||||| | | | Sbjct 10537 CTTAAGCTTGTGGATGACCTCAGCGAGCTGATCCACACCCTGACCGGTGTAATC-GGCGT 10595 Query 146031 GGA-GTCCACGTACGCGGCCCCGAAGTGCCTCCACTGGAACCCGTAGACGGGCCCCAGGT 146089 | | || ||| ||| || ||||| | ||||||||| || || || || || || | Sbjct 10596 GCATATCGGTATACTTGGCACCAAAGTGACGCCACTGGAAGCCATACACTGGACCGAGAT 10655 Query 146090 CCCCGGGCTCCCTGTGCCCCAGCCCGGCCCGGGCGAGGAAGTCCCGGGACCCGTTGGCGT 146149 | || | || | || || || ||| | | ||| | ||| || || ||| ||| Sbjct 10656 CGCCTGCTTCGCGATGACCGAGACCGATGCTTTCTAGGTATTCCTTCGATCCATTGCCGT 10715 Query 146150 CCCAGATCTTGACGCCC--CTCGCGGAGAGCTCATTGGAGTCCGTGGACCCCCTGATGAA 146207 |||| || | | | || || |||||| || |||| | |||| || |||||||| Sbjct 10716 CCCAAATATGAATGTCCTTGTCCTGGAGAG-TC-TTGGCATTCGTGTCACCGCTGATGAA 10773 Query 146208 CCAGAGCAGCTCTTCGAGGACCCCCCTCCAGAAGACCCTCTTGGTGGTCAGCAGGGGGAA 146267 ||| | ||||||||| || || | |||||| || | ||| || || |||| ||||| Sbjct 10774 CCACAACAGCTCTTCTGCAACGCCACGCCAGAACACGCGCTTCGTCGTGAGCACCGGGAA 10833 Query 146268 C 146268 | Sbjct 10834 C 10834 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 590069106873720