Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20periplocum_20[genbank_20GCA_5F001922765.1_202016-12-28] 1,043 sequences; 35,886,464 total letters Query= NC_008035.3 Length=126629 Score E Sequences producing significant alignments: (Bits) Value seq148 87.8 1e-12 >seq148 Length=18536 Score = 87.8 bits (96), Expect = 1e-12 Identities = 153/223 (69%), Gaps = 0/223 (0%) Strand=Plus/Plus Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783 || |||| |||| ||| |||||||| || ||||||||||| | | ||| | ||||| Sbjct 109 AGCACCAAGTGCAACGTAGACTCCTTCTGGATGTTGTAGTCCGAGAGGGTACGGCCGTCC 168 Query 16784 TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCG 16843 || | || ||||| || |||| | ||||| || || ||| | ||| || ||||| Sbjct 169 TCGAGCTGCTTGCCAGCGAAAATCAATCGCTGCTGATCTGGAGGAATGCCTTCCTTGTCC 228 Query 16844 GCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTT 16903 || | |||||| || | | | | | ||| ||||| || | || ||||| Sbjct 229 TGGATCTTCTGCTTGACGTTGTCGATCGAGTCCGAAGGCTCGACGTCGAGAGTAATGGTC 288 Query 16904 TTTCCGGTCAGCGTTTTGACAAAAATCTGCATTTTGTAGCCTT 16946 || ||||||| ||| || || || |||||||| |||| | ||| Sbjct 289 TTGCCGGTCAACGTCTTCACGAAGATCTGCATCTTGTTGTCTT 331 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 405082850698570