Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20periplocum_20[genbank_20GCA_5F001922765.1_202016-12-28] 1,043 sequences; 35,886,464 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq1035 122 2e-22 seq148 98.7 2e-15 >seq1035 Length=208423 Score = 122 bits (134), Expect = 2e-22 Identities = 144/194 (74%), Gaps = 6/194 (3%) Strand=Plus/Plus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || ||||| || ||||| | ||||||||| || || || | || || || |||||| Sbjct 98384 TCCTTCTGGATGTTGTAGTCCGAGAGCGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAG 98443 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 ||||||||||| || ||| |||||||| || |||||||| ||| || ||||| Sbjct 98444 ATCAGACGCTGCTGGTCTGGTGGAATTCCTTCCTTGTCCTGGATCTTCTGCTTGACGTTG 98503 Query 288403 TCTATAGAATCGCTCGAT---TCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459 || || || |||| || || ||||||||||| ||||| || ||||||||||| Sbjct 98504 TCAATGCTGTC---CGATGGCTCGACATCGAGCGTGATGGTCTTGCCCGTCAGAGTCTTC 98560 Query 288460 ACGAATATCTGCAT 288473 || || |||||||| Sbjct 98561 ACAAAGATCTGCAT 98574 >seq148 Length=18536 Score = 98.7 bits (108), Expect = 2e-15 Identities = 139/194 (72%), Gaps = 6/194 (3%) Strand=Plus/Minus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || ||||| || ||||| | ||| || || ||||| || | || || || || ||| Sbjct 18485 TCCTTCTGGATGTTGTAGTCCGAGAGGGTACGGCCGTCCTCGAGCTGCTTACCAGCAAAG 18426 Query 288343 ATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACG 288399 |||| |||||| ||| ||||| || ||||| || |||||||| ||| || || Sbjct 18425 ATCAAACGCTGCTGA---TCTGGAGGAATACCTTCCTTGTCCTGGATCTTCTGCTTGACA 18369 Query 288400 TTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459 || || || || || | || || || | ||| || ||||| ||||| || |||||| Sbjct 18368 TTGTCGATCGAGTCTGAAGGCTCGACGTCCAACGTAATGGTCTTGCCGGTGAGTGTCTTG 18309 Query 288460 ACGAATATCTGCAT 288473 ||||| |||||||| Sbjct 18308 ACGAAGATCTGCAT 18295 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179638635762154