Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20periplocum_20[genbank_20GCA_5F001922765.1_202016-12-28] 1,043 sequences; 35,886,464 total letters Query= NC_011056.1 Length=75811 Score E Sequences producing significant alignments: (Bits) Value seq318 131 8e-26 >seq318 Length=67156 Score = 131 bits (144), Expect = 8e-26 Identities = 391/591 (66%), Gaps = 23/591 (4%) Strand=Plus/Plus Query 65973 CGGGTAGTGGAGATCTACGGTCCTGAGTCTTCAGGGAAGTCAACGTTGTGCCTCCACGCG 66032 || || |||||||||||||| || ||| || || ||| | |||||| || | | | Sbjct 13695 CGTGTCGTGGAGATCTACGGCCCAGAGAGCTCGGGTAAGACCACGTTG-GCGTTGAGTTG 13753 Query 66033 G-TGGCCAATGCCCAGAAGGCCGGTGGCAACGCCGCCTACATCGACGCCGAACATTCTCT 66091 | || | |||||||| |||||||| | |||| ||||||||||| || | | Sbjct 13754 TATCGCAGAAGCCCAGAAAACCGGTGGCGTCTGTGCCTTTATCGACGCCGAGCACGCCAT 13813 Query 66092 CGACCCTGAGTACGCCGCGGCGCTCGGGGTGGATGTCGACAATCTCGTGGTTGTGC-AGC 66150 ||| | | | ||| | ||||| || | | ||| | || || | | | ||| Sbjct 13814 TGACGCCCACTGGGCCAAGCAACTCGGTGTCAACATTGACGA-CTTGTACATTTCCCAGC 13872 Query 66151 CAGACACTGGCGAGCAGGCCCTGGAGATCGTTGA--CCTTC--TCG-TCAAGTCTGGCGA 66205 ||||| |||| ||||||||||| |||||| || | || ||| || || | || Sbjct 13873 CAGACTCTGGTGAGCAGGCCCTCGAGATCACGGATACGTTGATTCGATCCGGT--GCCGT 13930 Query 66206 GGTTTCCATCATCGTTGTGGACTCTGTGGCGGCCCTGGTGCCGCGGGCGGAGCTCGAAGG 66265 || | || | || || ||| ||| ||||| |||||||| || || ||||||||||| Sbjct 13931 GGATC---TCGTGGTCGTCGACAGTGTCGCGGCGCTGGTGCCACGAGCCGAGCTCGAAGG 13987 Query 66266 GGACATCGGGGACTCGCACGTCGGCCTGCATGCCCGCCTGATGTCTCAGGCCATGCGCAA 66325 || || |||||| | || ||| |||| ||||| || ||| |||||| | ||||| Sbjct 13988 CGAGATGGGGGACCCCCAAATCGCGTTGCAAGCCCGTCTCATGAGTCAGGCGCTTCGCAA 14047 Query 66326 GCTGACCGGCACGATTGCCAGCACCAA---CACGCTCACCCTGTGGGTGAATCAGCTGCG 66382 ||| || ||| || | ||| |||| || ||||| | | | |||||| | || Sbjct 14048 GCTCACGGGCTCGCTCTCCAAGTCCAACTGCATGCTCA---TCTTCCTCAATCAGATCCG 14104 Query 66383 CGAGAAGATCGGCAACGTGGGCTACGGCCCGAATGAGACCACCACCGGTGGTAAGGCTCT 66442 ||||| |||| | | | || ||| || ||| |||| | ||||| | ||| || Sbjct 14105 TCAGAAGGTCGGGATCAT---CTTTGGCTCGCCGGAGGTCACCTCGGGTGGCACGGCACT 14161 Query 66443 GCGCTTCTACGCCTCGGTGCGTATGGATGTCCGCAGGATCGCCACCGAGAAGGAAGGCGA 66502 || | |||||| ||||||||| | ||| | || | | || | ||||||||||| Sbjct 14162 CCGTTACTACGCGTCGGTGCGTCTCGATATTCGTCGTAAGGCGGCGATCAAGGAAGGCGA 14221 Query 66503 TGAGGCTGTCGGCAACCGCACGCGCGTGAAGGTTGTCAAGAACAAGCTGGC 66553 | | || ||||| | || ||||| | ||||||||||||||| Sbjct 14222 CAAAGTCGTGGGCAATGAGATTGTGGTCAAGGTCGCCAAGAACAAGCTGGC 14272 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 242467317822356