Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20periplocum_20[genbank_20GCA_5F001922765.1_202016-12-28] 1,043 sequences; 35,886,464 total letters Query= NC_013756.1 Length=368454 Score E Sequences producing significant alignments: (Bits) Value seq1035 154 3e-32 seq132 109 1e-18 >seq1035 Length=208423 Score = 154 bits (170), Expect = 3e-32 Identities = 165/218 (76%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 ||||| | || || | ||| | ||||||||||| |||| ||||||||| | | || Sbjct 98354 CGAAGACGGAGCACCAAGTGCAAGGTCGACTCCTTCTGGATGTTGTAGTCCGAGAGCGTG 98413 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | ||||| || |||||||| ||||||||||| |||||||||||||| || ||||||| Sbjct 98414 CGGCCATCCTCGAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCTGGTGGAATTCCT 98473 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 || ||||| ||||| ||||| ||| || | | |||| | || || ||||| | | Sbjct 98474 TCCTTGTCCTGGATCTTCTGCTTGACGTTGTCAATGCTGTCCGATGGCTCGACATCGAGC 98533 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||||| ||||| ||||| ||||| |||||||| || || Sbjct 98534 GTGATGGTCTTGCCCGTCAGAGTCTTCACAAAGATCTG 98571 >seq132 Length=57701 Score = 109 bits (120), Expect = 1e-18 Identities = 96/120 (80%), Gaps = 0/120 (0%) Strand=Plus/Plus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 ||||| | || || | |||||| ||||||||||| |||| ||||||||| | ||| || Sbjct 9854 CGAAGGCGGAGCACCAAGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCCGACAAGGTG 9913 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | ||||| || |||||||| || |||||||| ||||||||||| || ||| ||||||| Sbjct 9914 CGGCCATCCTCAAGCTGCTTACCAGCGAAGATCAGACGCTGCTGATCTGGAGGAATTCCT 9973 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1178905845554881