Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20periplocum_20[genbank_20GCA_5F001922765.1_202016-12-28] 1,043 sequences; 35,886,464 total letters Query= NC_014649.1 Length=1181549 Score E Sequences producing significant alignments: (Bits) Value seq347 122 7e-22 >seq347 Length=87633 Score = 122 bits (134), Expect = 7e-22 Identities = 317/481 (66%), Gaps = 7/481 (1%) Strand=Plus/Plus Query 517853 TCAATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGCA 517912 |||| ||||| |||| || |||| |||| | |||| ||| || || || | Sbjct 19564 TCAACGCCTTCAAACAGTGAGTCAATCTCAAGATACGCCTGAGCCGAGGACGAGAGCGTG 19623 Query 517913 CGTTTAGCACGTTCACATGCTGTCCTTAGTCTTCGTAAGGCTTTTGCTGATTGAT--TCA 517970 ||||| ||||| |||||||| || | | | || |||||| ||||| || | ||| Sbjct 19624 CGTTTGGCACGCTCACATGCCGTGCGCAAGCGACGCAAGGCTC--GCTGACTGCTCGTCA 19681 Query 517971 AATCTGTTTTATATTTTCTCTTGAAATCTTCAACACACCATGTTACAAGACGATTATCAA 518030 || | || || | |||||| || || | | ||||||||||| |||| Sbjct 19682 TGTCCTTGCGGTACTTGCGCTTGAACTCGCTGACGAAATACTCCACAAGACGATTGTCAA 19741 Query 518031 AATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCTT 518090 | ||||| || || | | || | ||||| ||| || | |||| ||||| || |||| Sbjct 19742 AGTCTTCTCCACCAAGATGCGTGTCTCCTGCCGTTGCCTTGACTTCGAAAATGCCCTCTT 19801 Query 518091 CAAGAGACAAAAGAGTTACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCA 518150 | | | || ||| | || || || |||||||| | |||||| || || |||| Sbjct 19802 CGATCGTCAGCAGACTCACGTCGAACGTCCCACCACCGAGATCAAAGATGAGCACAT--- 19858 Query 518151 TTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAA 518210 | | | || || ||| |||||||| || | || || ||||| || ||||| | Sbjct 19859 GGTGCTCGCCTCCCTTGCGATCCAGACCATAGGCGATGGCTGCCGCAGTGGGCTCATTGA 19918 Query 518211 TAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTG 518270 | || | ||| ||||| | |||||||| || ||||| ||||| || || | |||| Sbjct 19919 TTATACGCAACACATTCAAGCCAGCAATGGCCCCAGCATCCTTAGTCGCCTGCCGCTGTG 19978 Query 518271 AATCGTTAAAATATGCAGGAACAGTAATAACGGCATCAGTTACTTCTTTACCAATATAAG 518330 | ||||| ||||| || || || ||||| || || | | || | || ||||| |||| Sbjct 19979 AGTCGTTGAAATACGCCGGCACGGTAATCACCGCGTTCTTGACCTGCTTGCCAATGTAAG 20038 Query 518331 C 518331 | Sbjct 20039 C 20039 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3780770642904358