Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20periplocum_20[genbank_20GCA_5F001922765.1_202016-12-28] 1,043 sequences; 35,886,464 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq1035 134 3e-26 seq148 134 3e-26 >seq1035 Length=208423 Score = 134 bits (148), Expect = 3e-26 Identities = 148/197 (75%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 194944 GTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTACCT 195003 || ||||| || || || ||||| || | || || | ||||| ||||||||||| || Sbjct 98378 GTCGACTCCTTCTGGATGTTGTAGTCCGAGAGCGTGCGGCCATCCTCGAGCTGCTTGCCG 98437 Query 195004 GCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTG 195063 |||||||| || || || |||||||| ||||| ||||| ||||| || || || |||||| Sbjct 98438 GCGAAGATCAGACGCTGCTGGTCTGGTGGAATTCCTTCCTTGTCCTGGATCTTCTGCTTG 98497 Query 195064 ACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGTT 195123 ||||| |||||| ||||||| || || || || || | ||||| || |||| ||| Sbjct 98498 ACGTTGTCAATGCTGTCCGATGGCTCGACATCGAGCGTGATGGTCTTGCCCGTCAGAGTC 98557 Query 195124 TTTACGAACACTTGCAT 195140 || || || | ||||| Sbjct 98558 TTCACAAAGATCTGCAT 98574 >seq148 Length=18536 Score = 134 bits (148), Expect = 3e-26 Identities = 148/197 (75%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 194944 GTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTACCT 195003 || ||||| || || || ||||| || | || || | || || ||||||||||| || Sbjct 124 GTAGACTCCTTCTGGATGTTGTAGTCCGAGAGGGTACGGCCGTCCTCGAGCTGCTTGCCA 183 Query 195004 GCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTG 195063 ||||| || | ||| || || ||||||||||||||||| ||||| || || || |||||| Sbjct 184 GCGAAAATCAATCGCTGCTGATCTGGAGGAATGCCTTCCTTGTCCTGGATCTTCTGCTTG 243 Query 195064 ACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGTT 195123 ||||| || || | ||||||| || || || || |||| ||||| || ||||| || Sbjct 244 ACGTTGTCGATCGAGTCCGAAGGCTCGACGTCGAGAGTAATGGTCTTGCCGGTCAACGTC 303 Query 195124 TTTACGAACACTTGCAT 195140 || ||||| | ||||| Sbjct 304 TTCACGAAGATCTGCAT 320 Score = 111 bits (122), Expect = 3e-19 Identities = 151/211 (72%), Gaps = 0/211 (0%) Strand=Plus/Minus Query 194944 GTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTACCT 195003 || ||||| || || || ||||| || | || || | || || |||||||||||||| Sbjct 18491 GTAGACTCCTTCTGGATGTTGTAGTCCGAGAGGGTACGGCCGTCCTCGAGCTGCTTACCA 18432 Query 195004 GCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTG 195063 || ||||| | || || || ||||||||||| ||||| ||||| || || || |||||| Sbjct 18431 GCAAAGATCAAACGCTGCTGATCTGGAGGAATACCTTCCTTGTCCTGGATCTTCTGCTTG 18372 Query 195064 ACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGTT 195123 || || || || | ||| ||| || || || | |||| ||||| || || | || Sbjct 18371 ACATTGTCGATCGAGTCTGAAGGCTCGACGTCCAACGTAATGGTCTTGCCGGTGAGTGTC 18312 Query 195124 TTTACGAACACTTGCATTTATGGTTACTTGG 195154 || ||||| | ||||| | |||| | ||| Sbjct 18311 TTGACGAAGATCTGCATCTTGGGTTTCCTGG 18281 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1109466773511981