Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20periplocum_20[genbank_20GCA_5F001922765.1_202016-12-28] 1,043 sequences; 35,886,464 total letters Query= NC_018504.1 Length=123876 Score E Sequences producing significant alignments: (Bits) Value seq148 95.1 1e-14 >seq148 Length=18536 Score = 95.1 bits (104), Expect = 1e-14 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 101273 GTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGCTTACCT 101332 ||||| || || || || ||||| || | || || | | | || || | ||||| || Sbjct 124 GTAGACTCCTTCTGGATGTTGTAGTCCGAGAGGGTACGGCCGTCCTCGAGCTGCTTGCCA 183 Query 101333 GCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTT 101392 || || ||||| ||||| ||||| || ||||||||||| || || || || || || || Sbjct 184 GCGAAAATCAATCGCTGCTGATCTGGAGGAATGCCTTCCTTGTCCTGGATCTTCTGCTTG 243 Query 101393 ACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTTAAAGTT 101452 || | || | | ||| || | || || || ||||| | || |||||||| || || Sbjct 244 ACGTTGTCGATCGAGTCCGAAGGCTCGACGTCGAGAGTAATGGTCTTGCCGGTCAACGTC 303 Query 101453 TTTACAAATATCTGCAT 101469 || || || |||||||| Sbjct 304 TTCACGAAGATCTGCAT 320 Score = 95.1 bits (104), Expect = 1e-14 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 101273 GTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGCTTACCT 101332 ||||| || || || || ||||| || | || || | | | || || | |||||||| Sbjct 18491 GTAGACTCCTTCTGGATGTTGTAGTCCGAGAGGGTACGGCCGTCCTCGAGCTGCTTACCA 18432 Query 101333 GCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTT 101392 ||||| ||||||||||| ||||| || ||||| ||||| || || || || || || || Sbjct 18431 GCAAAGATCAAACGCTGCTGATCTGGAGGAATACCTTCCTTGTCCTGGATCTTCTGCTTG 18372 Query 101393 ACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTTAAAGTT 101452 ||| | || | | ||| || | || || || | || | || |||||||| | || Sbjct 18371 ACATTGTCGATCGAGTCTGAAGGCTCGACGTCCAACGTAATGGTCTTGCCGGTGAGTGTC 18312 Query 101453 TTTACAAATATCTGCAT 101469 || || || |||||||| Sbjct 18311 TTGACGAAGATCTGCAT 18295 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396273362682351