Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20periplocum_20[genbank_20GCA_5F001922765.1_202016-12-28] 1,043 sequences; 35,886,464 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq549 188 1e-42 >seq549 Length=149600 Score = 188 bits (208), Expect = 1e-42 Identities = 398/579 (69%), Gaps = 16/579 (3%) Strand=Plus/Plus Query 25471 AAAGATATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATT 25530 || || || ||||| |||||||||||||| || | |||||| | ||| ||||| Sbjct 87642 AAGGAGATCTGGGATATGTACAAGAAGGCGGAAGCCAGCTTCTGGACGGTCGAGGAGATC 87701 Query 25531 GATCTGGCCAAGGACATGGACGGCTGGTACGCTCTATCCAAAGACGAGCAGCATTTTCTC 25590 ||||| | | ||| | | | |||| | | || | | |||| || || || Sbjct 87702 GATCTTGTGCACGACCTCAAGGACTGGAGCAACTTGACCGACAATGAGCGTCACTTCATC 87761 Query 25591 AAGTACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGA- 25649 ||| ||||| | || ||||| || ||| ||||||||| ||||||||||| || ||| | Sbjct 87762 AAGCACGTGCTCGCGTTCTTCGCTGCCAGTGATGGTATTGTGAACGAGAACCT-TGCCAT 87820 Query 25650 GAGATTCACCAGGGAAGTGCAG-TACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGATGG 25708 || |||| || ||||| ||| | | || || || || |||||||| |||||||| | Sbjct 87821 GAACTTCAGCAACGAAGTCCAGGTGCCTGAAGCCCGC-TGCTTCTACGGCTTCCAGATTG 87879 Query 25709 CCATCGAAAATGTGCACTCTGAGGTGTATGCCAAGCTTCTGATG---ACGTACATTACAG 25765 |||| || || | ||||| || |||| | ||| |||| |||||||| | | Sbjct 87880 CCATTGAGAACATCCACTCGGAAATGTACTC---GCTGTTGATTGACACGTACATCAAGG 87936 Query 25766 ACGTCGCCGAGAGAGATCGGCT-GTTTGGTGCCATCGAGCACATACCCA-GCATCAAGAG 25823 | | |||||||| ||| | || ||| | ||||| ||| ||| |||| || | ||| Sbjct 87937 ATGCCGCCGAGA-AGAACCACTTGTTCCGCGCCATTGAG-ACAATCCCATGCGTGCAGAA 87994 Query 25824 GAAGGCGCGGTGGGCCATGAAGTGGATCAACAGCCAGAGCGCTACGTTTGGCGAGCGGCT 25883 |||||| ||||| | ||| || ||| ||| |||||| ||||| | Sbjct 87995 GAAGGCCAACTGGGCGCTCCGCTGGTGTGACTCAGAGAACGCCGCGTTTGCTGAGCGTGT 88054 Query 25884 GGTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTT-TGCGGCCATCTTCT 25942 || ||||| ||||| | ||||| ||||| ||| |||||||| ||| | |||||| Sbjct 88055 CGTCGCCTTCGCTGCCATTGAGGGTATCTTCTTCTCGGGTTCGTTCTGCT-CGGTCTTCT 88113 Query 25943 GGCTCAAGCAGAAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTCATCAGCAGGG 26002 |||||||| || || |||||| || || ||| || |||||||| ||||| | | Sbjct 88114 GGCTCAAGAAGCGTGGTCTCATGCCTGGCCTCAGCTTCTCGAACGAGCTTATCAGTCGTG 88173 Query 26003 ACGAGGGTCTCCACAGAGATTTTGCCTGCCTGCTCTACA 26041 | || ||||||||| | || || |||||| ||||||||| Sbjct 88174 ATGAAGGTCTCCACTGTGACTTCGCCTGCTTGCTCTACA 88212 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928832690185920