Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20periplocum_20[genbank_20GCA_5F001922765.1_202016-12-28] 1,043 sequences; 35,886,464 total letters Query= NC_020104.1 Length=1021348 Score E Sequences producing significant alignments: (Bits) Value seq148 87.8 1e-11 >seq148 Length=18536 Score = 87.8 bits (96), Expect = 1e-11 Identities = 113/154 (73%), Gaps = 4/154 (3%) Strand=Plus/Minus Query 480618 TCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTTG 480677 || || || ||||| |||||||| || | ||| || ||||| |||||||| ||||||||| Sbjct 18449 TCCTCGAGCTGCTTACCAGCAAAGATCAAACGCTGCTGATCTGGAGGAATACCTTCCTTG 18390 Query 480678 TCTTGAATCTTTTGTTTGACAGCTTCAAT--AGTATCAGTGTGTGAAGTTTCAAGGGTAA 480735 || || ||||| || |||||| || || ||| | | | || | || | |||| Sbjct 18389 TCCTGGATCTTCTGCTTGACATTGTCGATCGAGTCTGAAGGCTCGACG--TCCAACGTAA 18332 Query 480736 TAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 | || || |||||||| ||||| ||||| || || Sbjct 18331 TGGTCTTGCCGGTGAGTGTCTTGACGAAGATCTG 18298 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3268134460669364