Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20periplocum_20[genbank_20GCA_5F001922765.1_202016-12-28] 1,043 sequences; 35,886,464 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq148 100 2e-16 >seq148 Length=18536 Score = 100 bits (110), Expect = 2e-16 Identities = 150/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 110270 AAAATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCT 110329 || ||||| || || || || || || |||||||| |||||||| |||| |||||| Sbjct 323 AAGATGCAGATCTTCGTGAAGACGTTGACCGGCAAGACCATTACTCTCGACGTCGAGCCT 264 Query 110330 GACGATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGAT 110389 || | ||| | | || || |||||||| ||||| |||||| | || ||| Sbjct 263 TCGGACTCGATCGACAACGTCAAGCAGAAGATCCAGGACAAGGAAGGCATTCCTCCAGAT 204 Query 110390 CAACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTAC 110449 || || || | |||| || || || ||||| ||||| | | | || | |||| ||| Sbjct 203 CAGCAGCGATTGATTTTCGCTGGCAAGCAGCTCGAGGACGGCCGTACCCTCTCGGACTAC 144 Query 110450 AACATTCAAAAAGAATCTACGTTGCACATGGTG 110482 ||||| || || || |||||||||||| ||||| Sbjct 143 AACATCCAGAAGGAGTCTACGTTGCACTTGGTG 111 Score = 91.5 bits (100), Expect = 1e-13 Identities = 148/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 110270 AAAATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCT 110329 || ||||| || || ||||| || | |||||||| |||||||| | || |||||| Sbjct 18292 AAGATGCAGATCTTCGTCAAGACACTCACCGGCAAGACCATTACGTTGGACGTCGAGCCT 18351 Query 110330 GACGATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGAT 110389 || | ||| | | || || |||||||| ||||| ||||| | || ||| Sbjct 18352 TCAGACTCGATCGACAATGTCAAGCAGAAGATCCAGGACAAGGAAGGTATTCCTCCAGAT 18411 Query 110390 CAACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTAC 110449 || || | | || | ||| ||||| ||||| ||||| | | | || | |||| ||| Sbjct 18412 CAGCAGCGTTTGATCTTTGCTGGTAAGCAGCTCGAGGACGGCCGTACCCTCTCGGACTAC 18471 Query 110450 AACATTCAAAAAGAATCTACGTTGCACATGGTG 110482 ||||| || || || |||||||||||| ||||| Sbjct 18472 AACATCCAGAAGGAGTCTACGTTGCACTTGGTG 18504 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 412836352138199