Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20periplocum_20[genbank_20GCA_5F001922765.1_202016-12-28] 1,043 sequences; 35,886,464 total letters Query= NC_022988.1 Length=74210 Score E Sequences producing significant alignments: (Bits) Value seq318 159 2e-34 >seq318 Length=67156 Score = 159 bits (176), Expect = 2e-34 Identities = 353/524 (67%), Gaps = 13/524 (2%) Strand=Plus/Plus Query 64806 GCGCAGAAGGCCGGTGGCAACGCCGCCTACATCGACGCTGAGCACTCCCTGGACCCTGAG 64865 || ||||| |||||||| | |||| |||||||| |||||| || | ||| | | Sbjct 13764 GCCCAGAAAACCGGTGGCGTCTGTGCCTTTATCGACGCCGAGCACGCCATTGACGCCCAC 13823 Query 64866 TACGCCAAGGCGCTCGGTGTGGACCTCGACAACCTCGTGGTGGTTCAGCCGGACACTGGC 64925 | |||||| |||||||| || | ||| || | | ||||| ||| |||| Sbjct 13824 TGGGCCAAGCAACTCGGTGTCAACATTGACGACTTGTACATTTCCCAGCCAGACTCTGGT 13883 Query 64926 GAGCAGGCCCTGGAGATCGTTGACCTCCTCG--TCAAGTCTGGCGAGCTGTCCATCGTCG 64983 ||||||||||| |||||| || | | | || | || || | || |||| | Sbjct 13884 GAGCAGGCCCTCGAGATCACGGATA-CGTTGATTCGA-TCCGGTGCCGTGGATCTCGTGG 13941 Query 64984 TCGTTGACTCTGTGGCGGCCCTGGTGCCGCGCGCCGAGCTCGAAGGCGACATCGGGGACA 65043 |||| ||| ||| ||||| |||||||| || ||||||||||||||||| || |||||| Sbjct 13942 TCGTCGACAGTGTCGCGGCGCTGGTGCCACGAGCCGAGCTCGAAGGCGAGATGGGGGACC 14001 Query 65044 GTCACGTCGGCCTGCACGCGCGCCTCATGTCGCAGGCCATGCGCAAGCTCACCGGCACCA 65103 || ||| |||| || || |||||| ||||| | ||||||||||| ||| | Sbjct 14002 CCCAAATCGCGTTGCAAGCCCGTCTCATGAGTCAGGCGCTTCGCAAGCTCACGGGCTCGC 14061 Query 65104 TCTCCAGCACCAA---CACGCTGACGCTCTGGGTCAACCAGTTGCGCGAGAAGATCGGCA 65160 |||||| |||| || ||| | ||| |||| ||| | || ||||| |||| | Sbjct 14062 TCTCCAAGTCCAACTGCATGCTCA---TCTTCCTCAATCAGATCCGTCAGAAGGTCGGGA 14118 Query 65161 ACGTGGGCTACGGCCCGAATGAGACCACCACGGGCGGCAAGGCTTTGAGGTTCTACGCCT 65220 | | || ||| || ||| |||| |||| |||| ||| | | | |||||| | Sbjct 14119 TCAT---CTTTGGCTCGCCGGAGGTCACCTCGGGTGGCACGGCACTCCGTTACTACGCGT 14175 Query 65221 CAGTCCGCATGGATGTCCGTCGCATCGCCACCGAGAAGGAAGGCGATGAGGCTGTCGGCA 65280 | || || | ||| | ||||| | || | ||||||||||| | | || |||| Sbjct 14176 CGGTGCGTCTCGATATTCGTCGTAAGGCGGCGATCAAGGAAGGCGACAAAGTCGTGGGCA 14235 Query 65281 ACCGCACCCGGGTGAAGGTCGTCAAGAACAAGCTGGCCCCGCCG 65324 | | ||| ||||||| |||||||||||||||| ||||| Sbjct 14236 ATGAGATTGTGGTCAAGGTCGCCAAGAACAAGCTGGCCTCGCCG 14279 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 237344182946233