Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20periplocum_20[genbank_20GCA_5F001922765.1_202016-12-28] 1,043 sequences; 35,886,464 total letters Query= NC_024697.1 Length=370920 Score E Sequences producing significant alignments: (Bits) Value seq669 149 1e-30 seq453 143 6e-29 >seq669 Length=27958 Score = 149 bits (164), Expect = 1e-30 Identities = 326/486 (67%), Gaps = 2/486 (0%) Strand=Plus/Plus Query 121163 CATGAATCCATCTTGTTGATTCCAACAATAACTTTCTCAATACCCAAAAGAGCAAGAATA 121222 || || |||||||||||||| || || || | | ||||||||||||||| || | | Sbjct 1 CACGAGTCCATCTTGTTGATACCGACGATGATCTGCTCAATACCCAAAAGGAAGAGGAGA 60 Query 121223 CGTGCGTGAAAACGTGTTTGACCTTGTGGGATTCCAGCAGAACGATCGCCTTTCGCAATA 121282 || ||||| ||| || ||||| | | || | | ||| | || ||||| Sbjct 61 CGAGCGTGCTGACGGGTCTGACCCTCATCAACACCCATCTTAGGGTCGGCCTTGGCAATG 120 Query 121283 GCAGATTCAAAACCAtttttttCAGCAGGAATAAGAATAAAAGCAGCATCGGCTT-GTCC 121341 |||| || |||||| || || || || | ||| |||| | |||| ||||| | || Sbjct 121 GCAGCCTCGAAACCACCCTTCTCGGCTGGCACAAGGATAAGACCAGCGTCGGCACAGCCC 180 Query 121342 GACGCCTGAAATCATATTCTTAATAAAGTCAATATGGCCTGGTGCATCAATAATAGAATA 121401 || || | |||||| ||||| || |||| | || ||||| ||||| | || | || Sbjct 181 GAA-CCGGTAATCATGTTCTTGATGTAGTCCTTGTGACCTGGCGCATCCACGATGGTGTA 239 Query 121402 ATGATAAGAATCTGTGTAAAATTCCTTAGTATTACAATTTACTGTAATTCCGCGCTCACG 121461 || || || ||| | || ||||| || ||||| | | || | || |||||||| Sbjct 240 GTGGTAGTTGTCGGTGAAGAACTCCTTGGTGTTACACTGGATGGTCACACCACGCTCACG 299 Query 121462 CTCTTCCTTGTTGTTATCCATGTAATAAGCAAATGCAAAACTAGATTTGCCGTTTGCGTC 121521 |||||||||| | |||||||| || || || || || || ||||| || || || Sbjct 300 CTCTTCCTTGCACGTGTCCATGTAGTACGCGAAGGCGAACGACGACTTGCCCTTGGCATC 359 Query 121522 GGCAAGTTCCTGCAACTTCGCCATCTCACGAGCATTTATGCCTCCCAATTTAAAGATAAG 121581 || |||| | ||| ||||||||||| | || || || | || ||||| || Sbjct 360 AGCCTCAGCCTGGAGCTTGGCCATCTCACGCTCGCCGATACCGCCGAGCTTGAAGATGAG 419 Query 121582 ATGACCGGTTGTTGTTGACTTTCCCGAGTCAACTTCACCACAGACCACCAAAGATATATG 121641 || ||||| || || ||||| || | || || | || ||||| ||||| || | || Sbjct 420 GTGGCCGGTCGTGGTCGACTTACCGGCATCGACGTGGCCGCAGACGACCAACGACAAGTG 479 Query 121642 TTGCTT 121647 ||||| Sbjct 480 CTGCTT 485 >seq453 Length=27042 Score = 143 bits (158), Expect = 6e-29 Identities = 323/483 (67%), Gaps = 2/483 (0%) Strand=Plus/Minus Query 121166 GAATCCATCTTGTTGATTCCAACAATAACTTTCTCAATACCCAAAAGAGCAAGAATACGT 121225 || |||||||||||||| || || || | | ||||||||||||||| || | ||| Sbjct 27039 GAGTCCATCTTGTTGATACCGACGATGATCTGCTCAATACCCAAAAGGAAGAGGAGACGA 26980 Query 121226 GCGTGAAAACGTGTTTGACCTTGTGGGATTCCAGCAGAACGATCGCCTTTCGCAATAGCA 121285 ||||| ||| || ||||| | | || | ||| | || || || ||| Sbjct 26979 GCGTGCTGACGGGTCTGACCCTCATCAACACCCATCTTTGGGTCGGCCTTGGCGATGGCA 26920 Query 121286 GATTCAAAACCAtttttttCAGCAGGAATAAGAATAAAAGCAGCATCGGCTT-GTCCGAC 121344 | || |||||| || || || || | ||| || | | |||| ||||| | |||| Sbjct 26919 GCCTCGAAACCACCCTTCTCGGCTGGCACAAGGATGAGACCAGCGTCGGCACAGCCCGAA 26860 Query 121345 GCCTGAAATCATATTCTTAATAAAGTCAATATGGCCTGGTGCATCAATAATAGAATAATG 121404 || | |||||| ||||| || |||| | || ||||| || || | ||| | || || Sbjct 26859 -CCGGTAATCATGTTCTTGATGTAGTCCTTGTGACCTGGCGCGTCCACAATGGTGTAGTG 26801 Query 121405 ATAAGAATCTGTGTAAAATTCCTTAGTATTACAATTTACTGTAATTCCGCGCTCACGCTC 121464 || || ||| | || ||||| || ||||| | | || | || ||||||||||| Sbjct 26800 GTAGTTGTCGGTGAAGAACTCCTTGGTGTTACACTGGATGGTCACACCACGCTCACGCTC 26741 Query 121465 TTCCTTGTTGTTATCCATGTAATAAGCAAATGCAAAACTAGATTTGCCGTTTGCGTCGGC 121524 ||||||| | |||||||| || ||||| || || || ||||| || || || || Sbjct 26740 TTCCTTGCACGTGTCCATGTAGTAGGCAAAGGCGAACGACGACTTGCCCTTGGCATCAGC 26681 Query 121525 AAGTTCCTGCAACTTCGCCATCTCACGAGCATTTATGCCTCCCAATTTAAAGATAAGATG 121584 |||| | ||| ||||||||||| || || || || | || ||||| | || Sbjct 26680 CTCGGCCTGGAGCTTGGCCATCTCACGCTCACCGATACCGCCGAGCTTGAAGATCAAGTG 26621 Query 121585 ACCGGTTGTTGTTGACTTTCCCGAGTCAACTTCACCACAGACCACCAAAGATATATGTTG 121644 ||| || || || ||||| || | || || | ||| || |||||||| || | || || Sbjct 26620 ACCAGTGGTGGTCGACTTGCCGGCATCGACGTGACCGCACACCACCAACGACAAGTGCTG 26561 Query 121645 CTT 121647 ||| Sbjct 26560 CTT 26558 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1186796940101323