Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20periplocum_20[genbank_20GCA_5F001922765.1_202016-12-28] 1,043 sequences; 35,886,464 total letters Query= NC_026421.1 Length=182380 Score E Sequences producing significant alignments: (Bits) Value seq272 187 3e-42 >seq272 Length=54113 Score = 187 bits (206), Expect = 3e-42 Identities = 317/454 (70%), Gaps = 4/454 (1%) Strand=Plus/Plus Query 146878 AGCTTGGGGAAGGGTCGGGGGTTCCTGGCCAGCTGAATTTTCAGGGGCTCCACGTGGTTG 146937 ||| | ||||| || || || | | ||| ||| || || || ||||| | |||||| Sbjct 10208 AGCGTCGGGAACGGACGAGGAGTGCGTCCCAACTGGATCTTGAGCGGCTCGAGGTGGTTC 10267 Query 146938 AGGTAGACGTGCGCGTCCCCCAGGGTGTGCACAAAGTCCCCCGGCTTAAGGCCGGTCACG 146997 | ||||| ||| || || || | | || || ||||| || | ||| || || | || Sbjct 10268 AAGTAGATGTGTGCATCACCAATGACATGGACGAAGTCACCGGCCTTGAGCCCAGCGACC 10327 Query 146998 TGGGCCACCATGTAGGTGAGCAGCGAGTAGCTGGCTATGTTGAAGGGGACCCCCAGGCCC 147057 || || | || ||| | || || ||| ||||| || || || || || || |||||| Sbjct 10328 TGAGCGATCAATCGGGTCAACAACGCGTAACTGGCGATATTAAACGGCACACCGAGGCCC 10387 Query 147058 ATGTCCCCCGACCTCTGGTACAGCTGGCACGAGAGCTCCCCGTCGGCCACGTAAAACTGG 147117 ||||| |||| | |||||||| |||||||||||||| || | || ||||| |||||| Sbjct 10388 ATGTCAGCCGATCGCTGGTACATTTGGCACGAGAGCTCGCCATTCGCGACGTAGAACTGG 10447 Query 147118 CACAGGATGTGGCACGGCGGCAGCGCCATGGCGGGCAGGTCCGCGGGGTTCCAGGCCGAG 147177 || | ||||||||||| || |||||||| | ||||| || || ||||| || || Sbjct 10448 CAGAACATGTGGCACGGAGGAAGCGCCATCTCCTTGAGGTCTGCTGGATTCCATGCAGAC 10507 Query 147178 ACCACCAGCCGCCTGCTCTCGGGGTTCCTCTTAATCTCTTCGATAACC-CACCTCAGCTG 147236 | | | |||| | | ||||| |||||| || | ||| ||| || | ||||| Sbjct 10508 AAGAGAATACGCCGGTCGTTCGGGTTGGTCTTAAGCTTGTGGATGACCTCAGC-GAGCTG 10566 Query 147237 GTCCACGCCCTGGCCCCCGTAGTTTGTCCCGCA-GTCCACGTACCTGGCCCCAAAGTGCC 147295 ||||| ||||| || ||| | | | ||| || ||| |||| |||||||| | Sbjct 10567 ATCCACACCCTGACCGGTGTA-ATCGGCGTGCATATCGGTATACTTGGCACCAAAGTGAC 10625 Query 147296 TCCACTGGAAGCCGTACACTGGCCCCAGGTCGCC 147329 |||||||||||| |||||||| || || ||||| Sbjct 10626 GCCACTGGAAGCCATACACTGGACCGAGATCGCC 10659 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583480392775200