Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20periplocum_20[genbank_20GCA_5F001922765.1_202016-12-28] 1,043 sequences; 35,886,464 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq1035 93.3 4e-14 >seq1035 Length=208423 Score = 93.3 bits (102), Expect = 4e-14 Identities = 148/210 (70%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 27039 ACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCG 27098 ||||| || || || || || || || || |||||||| | |||| | || ||| Sbjct 98366 ACCAAGTGCAAGGTCGACTCCTTCTGGATGTTGTAGTCCGAGAGCGTGCGGCCATCCTCG 98425 Query 27099 AGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCG 27158 ||||| || |||||| | || |||||||| || || || || | || || || || | Sbjct 98426 AGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCTGGTGGAATTCCTTCCTTGTCCTGG 98485 Query 27159 ATCTTGTTTTTCAGGGTTTCTACAGTGTCTG-TGGCTTCAACTTCTAGAGTTATAGATTT 27217 ||||| | || | | | || | |||| | ||||| | || || || || || | || Sbjct 98486 ATCTTCTGCTTGACGTTGTCAATGCTGTCCGATGGCT-CGACATCGAGCGTGATGGTCTT 98544 Query 27218 GCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 |||||||||||| ||||||||||| ||||| Sbjct 98545 GCCCGTCAGAGTCTTCACAAAGATCTGCAT 98574 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424928998419816