Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20periplocum_20[genbank_20GCA_5F001922765.1_202016-12-28] 1,043 sequences; 35,886,464 total letters Query= NC_029996.1 Length=134272 Score E Sequences producing significant alignments: (Bits) Value seq1035 91.5 1e-13 >seq1035 Length=208423 Score = 91.5 bits (100), Expect = 1e-13 Identities = 152/217 (70%), Gaps = 2/217 (1%) Strand=Plus/Plus Query 39075 CACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATC 39134 |||||| || | || ||| || || || || || || | || || || | || || Sbjct 98365 CACCAAGTGCAAGGTCGACTCCTTCTGGATGTTGTAGTCCGAGAGCGTGCGGCCATCCTC 98424 Query 39135 AAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCAT 39194 ||||| ||||| || || || |||||||||||||| | || | | || |||||| Sbjct 98425 GAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCTGGTGGAATTCCTTCCTTGTCCTG 98484 Query 39195 GATTTTCTGTTTGAGCGTCGCCACCG-TATCGCTCGACTCCACGTCCACCGTGATACTTT 39253 ||| ||||| |||| ||| | || | | || | ||| || || | |||||| | | Sbjct 98485 GATCTTCTGCTTGA-CGTTGTCAATGCTGTCCGATGGCTCGACATCGAGCGTGATGGTCT 98543 Query 39254 TTCCCGTCAGCGTTTTAACAAAGATTTGCATCTTTAC 39290 | |||||||| || || |||||||| ||||||||||| Sbjct 98544 TGCCCGTCAGAGTCTTCACAAAGATCTGCATCTTTAC 98580 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429540139804259