Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20periplocum_20[genbank_20GCA_5F001922765.1_202016-12-28] 1,043 sequences; 35,886,464 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq1035 125 2e-23 seq148 95.1 3e-14 >seq1035 Length=208423 Score = 125 bits (138), Expect = 2e-23 Identities = 151/204 (74%), Gaps = 1/204 (0%) Strand=Plus/Plus Query 151908 GTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCTTTTCCCG 151967 || ||||| || ||||||||||| || | | || | ||||| || || || ||| Sbjct 98378 GTCGACTCCTTCTGGATGTTGTAGTCCGAGAGCGTGCGGCCATCCTCGAGCTGCTTGCCG 98437 Query 151968 GCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTTTGTTTG 152027 |||||||| || | ||||||||| | | ||||||||||| || || || || || ||| Sbjct 98438 GCGAAGATCAGACGCTGCTGGTCTGGTGGAATTCCTTCCTTGTCCTGGATCTTCTGCTTG 98497 Query 152028 ACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTGAGAGTC 152087 || | || | |||||| || ||| || || || || || || |||||||| |||||| Sbjct 98498 ACGTTGTCAATGCTGTCCGATGGCTCGACATCGAGCGTGATGGTCTTGCCCGTCAGAGTC 98557 Query 152088 TTCACGAAGACCTGCAT-TTTACC 152110 ||||| |||| |||||| |||||| Sbjct 98558 TTCACAAAGATCTGCATCTTTACC 98581 >seq148 Length=18536 Score = 95.1 bits (104), Expect = 3e-14 Identities = 141/200 (71%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 151908 GTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCTTTTCCCG 151967 |||||||| || ||||||||||| || | | || | || || || || || || Sbjct 18491 GTAGACTCCTTCTGGATGTTGTAGTCCGAGAGGGTACGGCCGTCCTCGAGCTGCTTACCA 18432 Query 151968 GCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTTTGTTTG 152027 || ||||| | | |||||| || | | || |||||||| || || || || || ||| Sbjct 18431 GCAAAGATCAAACGCTGCTGATCTGGAGGAATACCTTCCTTGTCCTGGATCTTCTGCTTG 18372 Query 152028 ACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTGAGAGTC 152087 ||| | || | ||||||| ||| || || | ||||| || ||||| ||||| ||| Sbjct 18371 ACATTGTCGATCGAGTCTGAAGGCTCGACGTCCAACGTAATGGTCTTGCCGGTGAGTGTC 18312 Query 152088 TTCACGAAGACCTGCATTTT 152107 || ||||||| |||||| || Sbjct 18311 TTGACGAAGATCTGCATCTT 18292 Score = 91.5 bits (100), Expect = 3e-13 Identities = 140/200 (70%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 151908 GTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCTTTTCCCG 151967 |||||||| || ||||||||||| || | | || | || || || || || || Sbjct 124 GTAGACTCCTTCTGGATGTTGTAGTCCGAGAGGGTACGGCCGTCCTCGAGCTGCTTGCCA 183 Query 151968 GCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTTTGTTTG 152027 ||||| || | | |||||| || | | || |||||||| || || || || || ||| Sbjct 184 GCGAAAATCAATCGCTGCTGATCTGGAGGAATGCCTTCCTTGTCCTGGATCTTCTGCTTG 243 Query 152028 ACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTGAGAGTC 152087 || | || | ||| ||| ||| || || |||||||| || ||||| || | ||| Sbjct 244 ACGTTGTCGATCGAGTCCGAAGGCTCGACGTCGAGAGTAATGGTCTTGCCGGTCAACGTC 303 Query 152088 TTCACGAAGACCTGCATTTT 152107 |||||||||| |||||| || Sbjct 304 TTCACGAAGATCTGCATCTT 323 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1153805380987853