Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20periplocum_20[genbank_20GCA_5F001922765.1_202016-12-28] 1,043 sequences; 35,886,464 total letters Query= NC_031934.1 Length=168929 Score E Sequences producing significant alignments: (Bits) Value seq272 82.4 8e-11 >seq272 Length=54113 Score = 82.4 bits (90), Expect = 8e-11 Identities = 132/190 (69%), Gaps = 0/190 (0%) Strand=Plus/Plus Query 143873 GCGTAAGAGGCGATATTAAATGGCAATCCTAAGAACACGTCAACAGAACGTTGGTACCAC 143932 |||||| |||||||||||| |||| || | | || |||| | || || |||||| Sbjct 10352 GCGTAACTGGCGATATTAAACGGCACACCGAGGCCCATGTCAGCCGATCGCTGGTACATT 10411 Query 143933 TGGAGGTCAAGATGACCATTACGGACGTTGAACTGGTAAAAACAGTGGCACGGTGGAAGA 143992 ||| || | ||||| ||||| ||||||| | || ||||||||| ||||| Sbjct 10412 TGGCACGAGAGCTCGCCATTCGCGACGTAGAACTGGCAGAACATGTGGCACGGAGGAAGC 10471 Query 143993 GCCATCTTATTAATTTCTGCCGGGTTCCATGCTGATACGATTTGACGACGGTCATTAGGC 144052 ||||||| || | ||||| || |||||||| || | || ||| ||||| || || Sbjct 10472 GCCATCTCCTTGAGGTCTGCTGGATTCCATGCAGACAAGAGAATACGCCGGTCGTTCGGG 10531 Query 144053 ATTTTCTTAA 144062 | |||||| Sbjct 10532 TTGGTCTTAA 10541 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 540437753950920