Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20periplocum_20[genbank_20GCA_5F001922765.1_202016-12-28] 1,043 sequences; 35,886,464 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq1035 141 2e-28 >seq1035 Length=208423 Score = 141 bits (156), Expect = 2e-28 Identities = 164/219 (75%), Gaps = 4/219 (2%) Strand=Plus/Minus Query 177910 AGGTTAAAATGCTCCAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGG 177969 |||| || |||| | || || ||||| ||||| || || || || ||||| ||||| | Sbjct 98582 AGGTAAAGATGC---AGATCTTTGTGAAGACTCTGACGGGCAAGACCATCACGCTCGATG 98526 Query 177970 TGGAAAGCTCAGACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCC 178029 | || || |||| ||| || |||||||| || ||||| |||||||| |||||||| | Sbjct 98525 TCGAGCCATCGGACAGCATTGACAACGTCAAGCAGAAGATCCAGGACAAGGAAGGAATTC 98466 Query 178030 CTCCGGACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTG 178089 | || |||||||| || || ||||||||||| || |||||||| ||||| | || || Sbjct 98465 CACCAGACCAGCAGCGTCTGATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGCACGCTCT 98406 Query 178090 CCGATTATAACGTCCAAAAAGAATCAACACTGCATCTTG 178128 | || || ||| |||| || || || || |||| |||| Sbjct 98405 CGGACTACAACATCCAGAAGGAGTCGACCTTGCA-CTTG 98368 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203715114013342