Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharina_20japonica_20[genbank_20GCA_5F000978595.1_202015-04-22] 13,327 sequences; 543,425,876 total letters Query= NC_001611.1 Length=185578 Score E Sequences producing significant alignments: (Bits) Value seq3576 82.4 9e-11 >seq3576 Length=15149 Score = 82.4 bits (90), Expect = 9e-11 Identities = 143/206 (69%), Gaps = 8/206 (4%) Strand=Plus/Minus Query 53090 TTGATCTCATCATTCCATAATTTTCTC---TCGGTTAAAACTCTAAGGAGATGCGGATTA 53146 ||| || |||| ||||| | ||| | ||||| ||| ||||||| | |||| ||| Sbjct 5477 TTGGTCACATCGTTCCACA---TTCCCAGGTCGGTCAAATCTCTAAGTAAATGCTTATTC 5421 Query 53147 ACTACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCC 53206 || || |||||||| | ||| |||| ||| |||| | || || || | ||||| Sbjct 5420 ACCACACAGAATTCTCCGGCCAAAACTCGTCGATTGTACACGTTGCTCGTGAAAGGTTCA 5361 Query 53207 ACAGACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAAT 53266 | |||||||||||| || | || || ||||| || || || |||||| || |||| Sbjct 5360 ATAGACTCATTATTCCCAAGTATCTGTGCAGTGGAAGCGGTTGGCATAACAGCAGTCAAT 5301 Query 53267 AAACTATTTCTAAGACCGTATGTTCT 53292 || ||| | || |||| |||||| Sbjct 5300 AATGAATTCCGAATACCG--TGTTCT 5277 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 593622693402960