Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharina_20japonica_20[genbank_20GCA_5F000978595.1_202015-04-22] 13,327 sequences; 543,425,876 total letters Query= NC_002484.2 Length=56426 Score E Sequences producing significant alignments: (Bits) Value seq12292 89.7 2e-13 >seq12292 Length=560 Score = 89.7 bits (98), Expect = 2e-13 Identities = 122/168 (73%), Gaps = 2/168 (1%) Strand=Plus/Plus Query 48916 AAGCTGTTGGCCAGGGAGATCG-GATGCCCGGTGCTCCCGCTCTGCCAGCTCAACCGCGG 48974 |||||| |||| | |||| || | |||| | | ||| ||||| |||||||||||||| Sbjct 68 AAGCTGCTGGCGAAGGAGCTCCAGCTGCC-GATCATCCTGCTCTCGCAGCTCAACCGCGG 126 Query 48975 ATGTGAGTCTCGCCCGGATAAGCGCCCGGTGCTCAGCGACCTACGCGAGTCCGGCGCCAT 49034 || || | || ||||| ||| | || ||||| || ||||||||| | || Sbjct 127 GCCGGAAATGCGGGCAGACAAGCGGCCGCAGGTCTCGGACCTTCGTGAGTCCGGCTCGAT 186 Query 49035 CGAGCAAGACGCGGACATCGTGATGTTCGTGTACCGCGATGAAGTCTA 49082 |||||| ||||||||||| || || || |||||||||| || | ||| Sbjct 187 CGAGCAGGACGCGGACATGGTCATCCTCCTGTACCGCGACGACGCCTA 234 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 180413043650712