Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharina_20japonica_20[genbank_20GCA_5F000978595.1_202015-04-22] 13,327 sequences; 543,425,876 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq731 107 4e-18 >seq731 Length=224370 Score = 107 bits (118), Expect = 4e-18 Identities = 131/176 (74%), Gaps = 2/176 (1%) Strand=Plus/Plus Query 35550 CGGCATGGAATCCTATGGATCTTCACCTTATGGCTCTTCCTCCATGCCACATGA-CTGCT 35608 |||| ||||| || | ||| || | ||||| || || || ||||||||| |||| Sbjct 89406 CGGCCTGGAACCCGAAGGACCTCGGCAAGATGGCCCTGCCCCCGTGCCACATGTTCTGC- 89464 Query 35609 CAATTTTATGTGGCTAATGGAGAATTGTCGTGCCAGTTGTATCAGCGAAGCGGAGATGTC 35668 || || || ||||| || ||||| ||||||||||| |||| |||||||||| || | Sbjct 89465 CAGTTCTACGTGGCGAACGGAGAGCTGTCGTGCCAGATGTACCAGCGAAGCGCCGACATG 89524 Query 35669 GGGTTGGGCGTGCCCTTCAATATTGCATCATACTCTCTTCTGACTCATCTGATGGC 35724 || ||||| ||||| ||||| || ||||| ||| | || ||||| | ||| |||| Sbjct 89525 GGCTTGGGGGTGCCGTTCAACATCGCATCCTACGCGCTGCTGACGCGGCTGGTGGC 89580 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989415026367285