Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharina_20japonica_20[genbank_20GCA_5F000978595.1_202015-04-22] 13,327 sequences; 543,425,876 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq64 96.9 5e-15 >seq64 Length=648304 Score = 96.9 bits (106), Expect = 5e-15 Identities = 98/125 (78%), Gaps = 2/125 (2%) Strand=Plus/Plus Query 125449 AGGGCATCTTCTTTTCGGGTAGTTT-TGCGGCCATCTTTTGGCTCAAGAAGCGCGGACTC 125507 |||| || |||||||| || ||||| |||| | || || ||||||||||| ||||| ||| Sbjct 136205 AGGGAATTTTCTTTTCCGGAAGTTTCTGCG-CGATTTTCTGGCTCAAGAAACGCGGCCTC 136263 Query 125508 ATGCCCGGACTGACGCACAGTAACGAGTTTATATCTCGAGACGAGGGCCTACACTGTGAC 125567 |||||||| ||||| ||| |||||| | || ||| |||||||| | ||||| ||| Sbjct 136264 ATGCCCGGCCTGACCTTCAGCAACGAGATGATCAGTCGCGACGAGGGGTTGCACTGCGAC 136323 Query 125568 TTTGC 125572 || || Sbjct 136324 TTCGC 136328 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 740935748800520