Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharina_20japonica_20[genbank_20GCA_5F000978595.1_202015-04-22] 13,327 sequences; 543,425,876 total letters Query= NC_005337.1 Length=134431 Score E Sequences producing significant alignments: (Bits) Value seq365 107 2e-18 >seq365 Length=349966 Score = 107 bits (118), Expect = 2e-18 Identities = 121/162 (75%), Gaps = 0/162 (0%) Strand=Plus/Plus Query 5581 GCGCTCGCAGATCAGCTGCGCTATTCGGTCGCCCGTCTTTACCTCGAAATCGTTGTGGCC 5640 |||||| |||| || ||||| | |||||| ||| | || |||| ||| || | | || Sbjct 143149 GCGCTCCAAGATTAGTTGCGCCACTCGGTCCCCCTTGTTGACCTTGAAGTCTTCGCTTCC 143208 Query 5641 GAAGTTGAACAGCACCACGCCCACGTTGCCGCGGTAGTCGGCGTCTATCACGCCCGCGCC 5700 | ||||||||||||||| || ||| |||||| |||||| ||| | || ||||| || Sbjct 143209 GTGGTTGAACAGCACCACTCCGACGGGGCCGCGATAGTCGTAGTCCACGACTCCCGCCCC 143268 Query 5701 CACGTCGATGAAGTGCTTGACCGCCAGGCCGGAGCGGGGAGC 5742 || ||||| | | ||| |||||||| ||||| ||||| || Sbjct 143269 GACATCGATCATCTTCTTCACCGCCAGTCCGGATCGGGGGGC 143310 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429984549354824