Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharina_20japonica_20[genbank_20GCA_5F000978595.1_202015-04-22] 13,327 sequences; 543,425,876 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq194 89.7 4e-13 >seq194 Length=468613 Score = 89.7 bits (98), Expect = 4e-13 Identities = 147/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || || || ||||| | || ||||| | ||||| | || || || | || Sbjct 403539 ATGCAGATCTTCGTCAAGACCCTCACGGGTAAGACGATCACCTTGGATGTCGAACCCTCG 403480 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 ||||||||||| ||||||| || ||| ||||| || || || ||||| ||||| Sbjct 403479 GACACTATCGACGGCGTGAAGCAGAAGATCCAGGACAAGGAGGGCATCCCACCCGACCAG 403420 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 ||||| | || || ||||| || || | || || | |||||| || || ||||| Sbjct 403419 CAGCGTCTCATCTTCGCCGGAAAGCAGCTGGAGGACGGTCGCACCCTGTCTGACTACAAC 403360 Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 || || || || ||||| || || | ||||| Sbjct 403359 ATCCAGAAGGAGTCCACTCTCCACCTGGTGCT 403328 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433257617647505