Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharina_20japonica_20[genbank_20GCA_5F000978595.1_202015-04-22] 13,327 sequences; 543,425,876 total letters Query= NC_013055.1 Length=39896 Score E Sequences producing significant alignments: (Bits) Value seq12292 91.5 4e-14 >seq12292 Length=560 Score = 91.5 bits (100), Expect = 4e-14 Identities = 156/224 (70%), Gaps = 2/224 (1%) Strand=Plus/Plus Query 8878 GCGAAGGAACTCGACGTTCCGATCATCGCGCTGTCGCAGCTTAATCGAGGGCTCGAGAAT 8937 |||||||| ||| | | ||||||||| ||| |||||||| || || |||| || | Sbjct 77 GCGAAGGAGCTCCAGCTGCCGATCATCCTGCTCTCGCAGCTCAACCGCGGGCCGGAAATG 136 Query 8938 CGCCCAAACAAGCGGCCCGTCATGTCCGATCTGCGCGAGTCGGGTGCGATCGAGCAGGAT 8997 || || |||||||||| | || || || || ||||| || ||||||||||||| Sbjct 137 CGGGCAGACAAGCGGCCGCAGGTCTCGGACCTTCGTGAGTCCGGCTCGATCGAGCAGGAC 196 Query 8998 GCCGACGTGATCCTCTTTATCTACCGCGATGAGGTCTATAACCCCGACAGCGC-AGATCG 9056 || ||| || || || | | |||||||| || | ||| | || ||| | || | Sbjct 197 GCGGACATGGTCATCCTCCTGTACCGCGACGACGCCTACGAGAAGGAAAGCCCGAGGGC- 255 Query 9057 CGGTACGGCCGAAATCATCATTGCGAAGCAGCGAAACGGGCCGA 9100 ||| || ||| ||||| | | ||||| || |||||||||| Sbjct 256 CGGCGAGGTCGACATCATTGTCGGCAAGCACCGCAACGGGCCGA 299 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 127525414872492