Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharina_20japonica_20[genbank_20GCA_5F000978595.1_202015-04-22] 13,327 sequences; 543,425,876 total letters Query= NC_013797.1 Length=108592 Score E Sequences producing significant alignments: (Bits) Value seq76 89.7 4e-13 >seq76 Length=624063 Score = 89.7 bits (98), Expect = 4e-13 Identities = 161/233 (69%), Gaps = 2/233 (1%) Strand=Plus/Minus Query 39492 GCCGCCTCGCAAACGCAGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGC 39551 ||| |||||||| || || ||||| || | ||| || || || || || || || | Sbjct 336067 GCCACCTCGCAAGCGAAGCACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCCGA 336008 Query 39552 CAAAACGCGTTCATCGTCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGGG 39611 || ||| | || ||||| || ||||| |||| || | ||||||||| || | ||| Sbjct 336007 CAGCGTGCGGCCGTCCTCCAACTGCTTCCCCGCAAAGATGAGACGCTGCTGGTCGGGGGG 335948 Query 39612 TACGCCTTCTTTGTCGCATATTTTTTGTTTAATCGTCG-CTACTGTGTCTGCGCTTTCCA 39670 | |||||| ||||| || || || || | || || | | |||||| | || | Sbjct 335947 GATGCCTTCCTTGTCCTGGATCTTCTGCTTCA-CGCCGTCGATTGTGTCGGACGGCTCGA 335889 Query 39671 CGTCCAAAGTAATTGTTTTACCCGTTAAAGTTTTTACGAAGATCTGCATGTCG 39723 | |||| || || || |||||||| | || || ||||||||||||||| || Sbjct 335888 CATCCAGGGTGATCGTCTTACCCGTGAGGGTCTTGACGAAGATCTGCATGCCG 335836 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 347313179252591