Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharina_20japonica_20[genbank_20GCA_5F000978595.1_202015-04-22] 13,327 sequences; 543,425,876 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq1406 109 6e-19 seq85 96.9 4e-15 seq5475 93.3 5e-14 >seq1406 Length=118068 Score = 109 bits (120), Expect = 6e-19 Identities = 138/190 (73%), Gaps = 0/190 (0%) Strand=Plus/Minus Query 107114 TAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGT 107173 ||||| ||| ||| ||||||||| ||| || |||||||| || ||||||||||| Sbjct 75267 TAGATCCCGGAGATGCTGTCCTCCTTCATGGTGAGCAGGAAGCAGCTCGACATCTGCGGC 75208 Query 107174 CTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCTTGGGACATC 107233 | || || || || ||||||||||| || || ||||| |||| | | |||||||| Sbjct 75207 TTGGGGGTGCCGGCGTTGAAGAGGGTCGGCGTGGCGTGGGTGAAGAGCCGCTGGGACATG 75148 Query 107234 TTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATGGCCACACGC 107293 |||||| ||||| | ||| || |||| ||| ||||||||| | | ||| ||| Sbjct 75147 AGGTCGTACGTCTCGATGACCTTGTCGATGTTCTCCTTGTGGATGCCCACCGACACGCGC 75088 Query 107294 ATAAACATGT 107303 || | ||||| Sbjct 75087 ATGATCATGT 75078 >seq85 Length=604401 Score = 96.9 bits (106), Expect = 4e-15 Identities = 91/116 (78%), Gaps = 0/116 (0%) Strand=Plus/Minus Query 106502 TCTGTGTACTCTAAAATTTCTGTACACAAGTTGGAACTCTTAATCGTCCCCAAATTCTTT 106561 || |||||||| | ||||| || || | ||||| || ||||| |||| ||||| Sbjct 522783 TCGGTGTACTCGATGATTTCGGTGCAGAGATTGGACGATTTGATCGTGCCCAGGTTCTTC 522724 Query 106562 TGGTTACTCTTTTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTC 106617 ||||| ||||| |||||||||| |||||| | |||||||| |||||||||||||| Sbjct 522723 TGGTTGCTCTTGCTGTTGCACGCGTCCTTGAAAAGCATGTACGGCGTCCCCGTCTC 522668 >seq5475 Length=4812 Score = 93.3 bits (102), Expect = 5e-14 Identities = 89/114 (78%), Gaps = 0/114 (0%) Strand=Plus/Minus Query 106505 GTGTACTCTAAAATTTCTGTACACAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGG 106564 |||||||| | || || || || | |||||| ||| ||||| |||| ||||| ||| Sbjct 3775 GTGTACTCGACGATCTCCGTGCAGAGGTTGGAGGACTTGATCGTGCCCAGGTTCTTCTGG 3716 Query 106565 TTACTCTTTTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCC 106618 || ||||| ||||||||| |||||||| ||||||||||| || || |||||| Sbjct 3715 TTGCTCTTGAAGTTGCACGCGTCCTTGTACAGCATGTAGGGAGTTCCGGTCTCC 3662 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589882516573480