Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharina_20japonica_20[genbank_20GCA_5F000978595.1_202015-04-22] 13,327 sequences; 543,425,876 total letters Query= NC_015282.1 Length=174079 Score E Sequences producing significant alignments: (Bits) Value seq2386 145 8e-30 >seq2386 Length=46605 Score = 145 bits (160), Expect = 8e-30 Identities = 510/745 (68%), Gaps = 55/745 (7%) Strand=Plus/Plus Query 163994 CAATGCAA--TTGGTCTTCAC--TTCTAC---CCCATTTGGGAAG---CCGCATCCCTTG 164043 ||| |||| ||||| ||| | |||||| | ||||||||||| | || || ||| Sbjct 37221 CAAAGCAAGTTTGGTATTCCCATTTCTACGGCCACATTTGGGAAGGGGCTGCTTCAGTTG 37280 Query 164044 AT-GAATGGCTTTAC-AACGGTGGTCCTTTCCAACTTGTCGTCTTCCACTTCCTGATCGG 164101 | |||||| | ||| || ||||| |||| |||| | |||| ||||| ||| | || || Sbjct 37281 AAAGAATGGTTATACCAATGGTGG-CCTTACCAATTAATCGTATTCCATTTCTTAATTGG 37339 Query 164102 TATCTATGCATACATGGGTCGTGAGTGGGAA-CTGTCTTACCGTCTT--GGTATGCGTCC 164158 | | | | ||||||||||| |||||| || ||| || || ||||||||||| Sbjct 37340 TGCTTCTTGTTGGATGGGTCGTGAATGGGAAACTTAGCTACGGTGTTTAGGTATGCGTCC 37399 Query 164159 TTGGATTTGTGTTGCTTACTCTGCACCCGTTG-CAGCAGCATCCGCAGTCTTCCTGGTCT 164217 ||| || || || | ||||| | || | ||||||| || || || ||| | | | Sbjct 37400 TTGATGTTTCGTAGCATTCTCTGT-CAAGTAGACAGCAGC-TCTGCGGTATTC-TAATTT 37456 Query 164218 ATCCTTTCGGTCAAGGTTCGTT-CT-CTGACGCAATGCCCCTGGGCATC--TCTGGCACC 164273 | |||| | |||| | | ||| || |||||| |||| || || ||||| | | Sbjct 37457 ACCCTTCGGATCAATGGTAGTTTCTGCTGACGGTATGCTTTATGGTATTGTTCTGGTAGC 37516 Query 164274 -TTCAACTACATGTT-GGTGTTCCAA--GCA-GAGCACAACATCCTGATGCACCCC--TT 164326 || |||| |||| | ||| |||||| || || || ||| | | ||||||| || Sbjct 37517 ATTTAACTTCATGATCGGTTTTCCAAAAGCTCGAACATAACTTT-TAATGCACCTGGATT 37575 Query 164327 CCATA-TGCTCGGCGTTGCTGGCGTATTTGGCGGTTCTCTGTTCAGTGCAAT-GCACGGT 164384 ||||| || || |||||||| ||| | |||| | ||||||| || ||| ||| Sbjct 37576 CCATAATGGCTGGTGTTGCTGGATGTTTTCGTGGTTATTATATCAGTGCTATCGCATGGT 37635 Query 164385 TCT-CTGGTTACTTCTTCGCTGGTTCGTGAAACCACC-GAAACTGAGTCCCAGAACTATG 164442 ||| || || | ||| | | |||||||| | ||| ||| || || || | Sbjct 37636 TCTTCTAGTAA-TTCAAGTTTAATACGTGAAACGAAGTGAAGTTGAATCTGTTAA-TACG 37693 Query 164443 GTTACAAGTTT-GGTCA-AGA-AGAAGAAACATACAACATTGTTGCCGCTCA-CGGTTAC 164498 ||||||| || || || ||| ||||||||| ||||||||||| || || || |||||| Sbjct 37694 GTTACAAAATTCGGACAGAGATAGAAGAAACTTACAACATTGTAGCTGCACATAGGTTAC 37753 Query 164499 TTTGG--TCGTCTGATCTT--CCAATA--CGCTTCATT-CAACA-ACTCCCG-TTCCTTG 164549 ||||| ||| | ||||| || || ||| || ||||| |||| | | || Sbjct 37754 TTTGGGTGCGTTTAATCTTGCGCAGTAGCAGCTAGTTTACAACAGACTCTAGAGGCTTTA 37813 Query 164550 CACTTCTTCCTTGCTGCATGGCCTGTTGTTGGCATCTGGTTCACCGCACTTGGTGTTTCC 164609 || ||||||||||| |||||||||| ||||| || ||||| || || | |||| || Sbjct 37814 CATTTCTTCCTTGC-GCATGGCCTGAAGTTGGGATTTGGTTAACAGCTTTAGGTG-TTGT 37871 Query 164610 ACGATGGCATTCAACCTGAACGGTTTCAACTTCAACCAGTCCATCATCGATGGT-CAGGG 164668 || |||||||| ||| | || ||||| | ||| |||||||| | | ||| || | || Sbjct 37872 ACTATGGCATTTAACTTAAATGGTTT-AGCTTTAACCAGTCTGTTGTAGATAGTAGAAGG 37930 Query 164669 TCGTGTGCTCAACACTTGGGCAGAC 164693 |||||| | | || ||||| ||| Sbjct 37931 TCGTGTATTAACGACATGGGCTGAC 37955 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556832023289880