Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharina_20japonica_20[genbank_20GCA_5F000978595.1_202015-04-22] 13,327 sequences; 543,425,876 total letters Query= NC_015285.1 Length=174285 Score E Sequences producing significant alignments: (Bits) Value seq2386 150 2e-31 >seq2386 Length=46605 Score = 150 bits (166), Expect = 2e-31 Identities = 518/748 (69%), Gaps = 65/748 (9%) Strand=Plus/Plus Query 162621 CATCTGGGAAG---CCGCATCACTTGAT-GAGTGGCTGTAT-AACGGTGGTCCTTTCCAA 162675 ||| ||||||| | || ||| |||| || ||| | || || ||||| |||| |||| Sbjct 37255 CATTTGGGAAGGGGCTGCTTCAGTTGAAAGAATGGTTATACCAATGGTGG-CCTTACCAA 37313 Query 162676 CTCGTAGTATTCCACTTCCTGATCGG--CATCTATGCCTACATGGGACGTGAATGGGAA- 162732 | | |||||||| ||| | || || | ||| || | ||||| |||||||||||| Sbjct 37314 TTAATCGTATTCCATTTCTTAATTGGTGCTTCT-TGT-TGGATGGGTCGTGAATGGGAAA 37371 Query 162733 CTCTCTTACCGTCTT--GGTATGCGTCCATGGATCTGCGTAGCATACTCTGCACCTGTTG 162790 || ||| || || ||||||||||| || | |||||||| ||||| | || | Sbjct 37372 CTTAGCTACGGTGTTTAGGTATGCGTCCTTGATGTTTCGTAGCATTCTCTG-TCAAGTAG 37430 Query 162791 -CAGCAGCATCGGCAGTCTTCCTGGTCTATCCTTTCGGTCAA-GGTTCTTTCT-CTGACG 162847 ||||||| || || || || || | || |||| | |||| ||| ||||| |||||| Sbjct 37431 ACAGCAGC-TCTGCGGTATT-CTAATTTACCCTTCGGATCAATGGTAGTTTCTGCTGACG 37488 Query 162848 CAATGCCCTTGGGTAT--CAGTGGTA-CATTCAACTACATGCT-TGTCTTCC--AAGC-A 162900 |||| | ||||| ||||| |||| |||| |||| | || |||| |||| Sbjct 37489 GTATGCTTTATGGTATTGTTCTGGTAGCATTTAACTTCATGATCGGTTTTCCAAAAGCTC 37548 Query 162901 GAGCACAACATTCTGATGCA--TCCCTTCCA-CATGTTGGGTGTCGCAGG-TGTCTTCGG 162956 || || ||| || | ||||| | ||||| ||| ||||| || || ||| ||| | Sbjct 37549 GAACATAAC-TTTTAATGCACCTGGATTCCATAATGGCTGGTGTTGCTGGATGTTTTC-G 37606 Query 162957 TGGTTCACTGT-TCAGTGCAAT-GCACGGTTCTT-TGGT--TACATCTTCACTCGTCCGT 163011 ||||| | | | ||||||| || ||| ||||||| | || | || || | | ||| Sbjct 37607 TGGTT-ATTATATCAGTGCTATCGCATGGTTCTTCTAGTAATTCAAGTT---TAATACGT 37662 Query 163012 GAGACG-ACTGAAACTGAGTCACAGAACTATGGTTAC-AAGTTCGGTCA-AGA-AGAAGA 163067 || ||| | |||| ||| || || || |||||| || ||||| || ||| |||||| Sbjct 37663 GAAACGAAGTGAAGTTGAATCTGTTAA-TACGGTTACAAAATTCGGACAGAGATAGAAGA 37721 Query 163068 GACATACAACATCGTCGCAGCCCAT-GGTTACTTCGG--TCGTTTGATCTT--CCAATAT 163122 || |||||||| || || || ||| |||||||| || ||||| ||||| || || Sbjct 37722 AACTTACAACATTGTAGCTGCACATAGGTTACTTTGGGTGCGTTTAATCTTGCGCAGTA- 37780 Query 163123 GCATC----ATTCAACA-ACTCCCG-TTCCTTGCACTTCTTCCTTGCTGCATGGCCTGTT 163176 ||| | | ||||| |||| | | || || ||||||||||| |||||||||| Sbjct 37781 GCAGCTAGTTTACAACAGACTCTAGAGGCTTTACATTTCTTCCTTGC-GCATGGCCTGAA 37839 Query 163177 GTCGGCATCTGGTTCACCGCCCTTGGCGTGTCAACCATGGCATTCAACCTGAACGGTTTC 163236 || || || ||||| || || | || || | || |||||||| ||| | || ||||| Sbjct 37840 GTTGGGATTTGGTTAACAGCTTTAGGTGT-TGTACTATGGCATTTAACTTAAATGGTTT- 37897 Query 163237 AACTTCAACCAGTCCATCCTTGATGGT-CAGGGTCGTGTGTTGAACACCTGGGCAGACGT 163295 | ||| |||||||| | | ||| || | |||||||| || | || ||||| ||| | Sbjct 37898 AGCTTTAACCAGTCTGTTGTAGATAGTAGAAGGTCGTGTATTAACGACATGGGCTGACAT 37957 Query 163296 TCTGAACCGTGCAGGTTT-GGGTATGGA 163322 |||||||||| ||| |||||||| Sbjct 37958 --ATAACCGTGCAGATTTAAGGTATGGA 37983 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 557491113475400