Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharina_20japonica_20[genbank_20GCA_5F000978595.1_202015-04-22] 13,327 sequences; 543,425,876 total letters Query= NC_015286.1 Length=175230 Score E Sequences producing significant alignments: (Bits) Value seq2386 109 6e-19 >seq2386 Length=46605 Score = 109 bits (120), Expect = 6e-19 Identities = 342/486 (70%), Gaps = 39/486 (8%) Strand=Plus/Plus Query 167349 GAGTGGTTGTAC-AATGGTGGTCCTTTCCAACTCGTAGTTTTCCACTTCCTGATTGG--C 167405 || ||||| ||| |||||||| |||| |||| | | || ||||| ||| | ||||| | Sbjct 37284 GAATGGTTATACCAATGGTGG-CCTTACCAATTAATCGTATTCCATTTCTTAATTGGTGC 37342 Query 167406 ATCTATGCCTATATGGGTCGTGAGTGGG-AACTCTCTTAC--CGTCTCGGTATGCGTCCC 167462 ||| || | ||||||||||| |||| |||| ||| || | ||||||||| || Sbjct 37343 TTCT-TGT-TGGATGGGTCGTGAATGGGAAACTTAGCTACGGTGTTTAGGTATGCGT-CC 37399 Query 167463 TGGATCTGT-GTTGCATACTCTGCTCCAGTCG-CTGCAGCATCTGCTGTATTCCTCGTCT 167520 | ||| | | || |||| ||||| || ||| | | ||||| ||||| ||||| || | | Sbjct 37400 TTGATGTTTCGTAGCATTCTCTG-TCAAGTAGACAGCAGC-TCTGCGGTATT-CTAATTT 37456 Query 167521 ATCCTTTCGGTCAA-GGTTCTTTCT-CTGACGCGATGCCTCTTGGTAT--CTCTGGTA-C 167575 | |||| | |||| ||| ||||| |||||| |||| | |||||| ||||||| | Sbjct 37457 ACCCTTCGGATCAATGGTAGTTTCTGCTGACGGTATGCTTTATGGTATTGTTCTGGTAGC 37516 Query 167576 ATTCAACTACATGCT-TGTCTTCC--AAGC-AGAGCACAACATCCTGATGCACC--CCTT 167629 ||| |||| |||| | || |||| |||| || || ||| | | ||||||| || Sbjct 37517 ATTTAACTTCATGATCGGTTTTCCAAAAGCTCGAACATAAC-TTTTAATGCACCTGGATT 37575 Query 167630 CCAT-ATGCTCGGCGTTGCTGG-CGTATTCGGCGGTTCTCTGTTCAGTGCAAT-GCACGG 167686 |||| ||| || |||||||| || ||| | |||| | ||||||| || ||| || Sbjct 37576 CCATAATGGCTGGTGTTGCTGGATGTTTTC-GTGGTTATTATATCAGTGCTATCGCATGG 37634 Query 167687 TTC-TCTGGTTACCTCTTCGCTGGTTCGTGAAAC-CACCGAAACTGAGTCCCAGAACTAT 167744 ||| ||| | || || | | |||||||| | ||| ||| || || || Sbjct 37635 TTCTTCTAG-TAATTCAAGTTTAATACGTGAAACGAAGTGAAGTTGAATCTGTTAA-TAC 37692 Query 167745 GGTTAC-AAGTTCGGTCAG-GA-AGAAGAGACGTATAACATCGTCGCTGCTCAT-GGTTA 167800 |||||| || ||||| ||| || |||||| || || ||||| || ||||| ||| ||||| Sbjct 37693 GGTTACAAAATTCGGACAGAGATAGAAGAAACTTACAACATTGTAGCTGCACATAGGTTA 37752 Query 167801 CTTCGG 167806 ||| || Sbjct 37753 CTTTGG 37758 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 560514609714800