Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharina_20japonica_20[genbank_20GCA_5F000978595.1_202015-04-22] 13,327 sequences; 543,425,876 total letters Query= NC_015289.1 Length=176184 Score E Sequences producing significant alignments: (Bits) Value seq2386 152 6e-32 >seq2386 Length=46605 Score = 152 bits (168), Expect = 6e-32 Identities = 458/659 (69%), Gaps = 50/659 (8%) Strand=Plus/Plus Query 165025 GAATGGTTGTAC-AACGGTGGTCCTTACCAGTTGGTTGTCTTCCACTTCCTCATCGGTGT 165083 |||||||| ||| || ||||| |||||||| || | || ||||| ||| | || |||| Sbjct 37284 GAATGGTTATACCAATGGTGG-CCTTACCAATTAATCGTATTCCATTTCTTAATTGGTGC 37342 Query 165084 AGCTTGCTACATGGGTCGTGAGTGGG-AACTGTCTTAC--CGCCTCGGTATGCGTCCTTG 165140 |||| | ||||||||||| |||| |||| ||| | | |||||||||||||| Sbjct 37343 TTCTTGTTGGATGGGTCGTGAATGGGAAACTTAGCTACGGTGTTTAGGTATGCGTCCTTG 37402 Query 165141 GATTTGCGTAGCATATAGCGCACCTGTCG-CTGCTGCTGCCGCAGTTTTCCTGGTCTATC 165199 || |||||||| | | | || | | || ||| | || || || || | || | Sbjct 37403 ATGTTTCGTAGCAT-TCTCTGTCAAGTAGACAGCAGCT-CTGCGGTATT-CTAATTTACC 37459 Query 165200 CTTTCGGTCAA-GGGAGTTTCT-CTGATGGTATGCCTCTTGGTAT--CTCTGGTA-CTTT 165254 ||| | |||| || ||||||| |||| ||||||| | |||||| ||||||| | || Sbjct 37460 CTTCGGATCAATGGTAGTTTCTGCTGACGGTATGCTTTATGGTATTGTTCTGGTAGCATT 37519 Query 165255 TAACTATATGTTC-GTCTTCC--AAGC-AGAACATAACATTCTTATGCATCCG--TTCCA 165308 ||||| ||| || || |||| |||| ||||||||| || | ||||| | | ||||| Sbjct 37520 TAACTTCATGATCGGTTTTCCAAAAGCTCGAACATAAC-TTTTAATGCACCTGGATTCCA 37578 Query 165309 -CATGCTCGGCGTTGCTGG-GGTATTCGGTGGATCTCTTTTCTCTGCTAT-GCATGGAAG 165365 ||| || |||||||| || ||| |||| | | | || |||||| |||||| Sbjct 37579 TAATGGCTGGTGTTGCTGGATGTTTTC-GTGGTTATTATATCAGTGCTATCGCATGG--T 37635 Query 165366 TCTTGT--TACTTCCTCACTCGTCCGCGAGAC-AACTGAAACAGAGAGTCAGAACTACGG 165422 |||| | || ||| | | || || || || |||| || | || ||||| Sbjct 37636 TCTTCTAGTAATTCAAGTTTAATACGTGAAACGAAGTGAAGTTGAATCTGTTAA-TACGG 37694 Query 165423 TTA-TAAGTTTGGACA-AGA-AGAAGAGACCTATAACATCGTCGCTGCCCA-CGGGTACT 165478 ||| || || ||||| ||| |||||| || || ||||| || ||||| || || |||| Sbjct 37695 TTACAAAATTCGGACAGAGATAGAAGAAACTTACAACATTGTAGCTGCACATAGGTTACT 37754 Query 165479 TCGG--TCGTCTCATTTT--CCAATACGCATC----CTTCAACA-ATTCCCG-TTCGCTG 165528 | || ||| | || || || || ||| | | ||||| | || | | | Sbjct 37755 TTGGGTGCGTTTAATCTTGCGCAGTA-GCAGCTAGTTTACAACAGACTCTAGAGGCTTTA 37813 Query 165529 CACTTCTTCCTCGCAGCATGGCCTGTAGTTGGTATCTGGTTCACTGCTCTTGGTGTTAGC 165588 || |||||||| || |||||||||| |||||| || ||||| || ||| | |||||| | Sbjct 37814 CATTTCTTCCTTGC-GCATGGCCTGAAGTTGGGATTTGGTTAACAGCTTTAGGTGTT-GT 37871 Query 165589 ACCATGGCATTCAACCTGAACGGTTTCAACTTCAACCAGTCTATTGTTGATAGTCAGAA 165647 || |||||||| ||| | || ||||| | ||| ||||||||| |||| |||||| |||| Sbjct 37872 ACTATGGCATTTAACTTAAATGGTTT-AGCTTTAACCAGTCTGTTGTAGATAGT-AGAA 37928 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 563566901156480