Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharina_20japonica_20[genbank_20GCA_5F000978595.1_202015-04-22] 13,327 sequences; 543,425,876 total letters Query= NC_015290.1 Length=182180 Score E Sequences producing significant alignments: (Bits) Value seq2386 147 3e-30 >seq2386 Length=46605 Score = 147 bits (162), Expect = 3e-30 Identities = 494/716 (69%), Gaps = 55/716 (8%) Strand=Plus/Plus Query 169951 GAGTGGTTGTAT-AACGGTGGTCCTTATCAATTAGTTATCTTCCACTTCCTTATCGGAAT 170009 || ||||| || || ||||| ||||| |||||| | | ||||| ||| | || || Sbjct 37284 GAATGGTTATACCAATGGTGG-CCTTACCAATTAATCGTATTCCATTTCTTAATTGGTGC 37342 Query 170010 CTCTGCCTACATGGGTAGACAGTGGGAA-CTATCATACCGT--TTAGGTATGCGTCCTTG 170066 ||| | |||||| | | |||||| || ||| || ||||||||||||||||| Sbjct 37343 TTCTTGTTGGATGGGTCGTGAATGGGAAACTTAGCTACGGTGTTTAGGTATGCGTCCTTG 37402 Query 170067 GATCTGT-GTAGCATATTCTGCTCCAGT-GTCAGCAGCATTCGCTGTATTCTTAGTGTAT 170124 || | | ||||||| |||| || ||| | ||||||| | || ||||||| | | || Sbjct 37403 -ATGTTTCGTAGCATTCTCTG-TCAAGTAGACAGCAGCTCT-GCGGTATTCTAATT-TAC 37458 Query 170125 CCTTTCGGTCAGGGATC-TTTCT-CAGACGGAATGCCTCTAGGTATC--TCAGGTA-CAT 170179 |||| | ||| | | ||||| | ||||| |||| | ||||| || |||| ||| Sbjct 37459 CCTTCGGATCAATGGTAGTTTCTGCTGACGGTATGCTTTATGGTATTGTTCTGGTAGCAT 37518 Query 170180 TTAACTTCATGTTCG-TATTCCAA--GCA-GAGCACAACATTCTTATGCACCC--ATTCC 170233 ||||||||||| ||| | |||||| || || || ||| || | ||||||| ||||| Sbjct 37519 TTAACTTCATGATCGGTTTTCCAAAAGCTCGAACATAACTTT-TAATGCACCTGGATTCC 37577 Query 170234 ATA-TGGCAGGGGTTGCTGGTATGTTCGGAGGAGCACTCT-TCTCAGCAAT-GCACGGTT 170290 ||| |||| || |||||||| ||||| | | | | || || || ||| |||| Sbjct 37578 ATAATGGCTGGTGTTGCTGG-ATGTTTTCGTGGTTATTATATCAGTGCTATCGCATGGTT 37636 Query 170291 CA-CTTGTAACATCTTCTCTAATCAGAGAGAC-AACAGATAACGAGTCACAGAACTATGG 170348 | || |||| || | |||| | || || || || || || || || || Sbjct 37637 CTTCTAGTAAT-TCAAGTTTAATACGTGAAACGAAGTGAAGTTGAATCTGTTAA-TACGG 37694 Query 170349 ATACAAA-TTCGGACA-AGA-AGAAGAAACATACAACATTGTTGCAGCACAT-GGATACT 170404 |||||| |||||||| ||| ||||||||| ||||||||||| || |||||| || |||| Sbjct 37695 TTACAAAATTCGGACAGAGATAGAAGAAACTTACAACATTGTAGCTGCACATAGGTTACT 37754 Query 170405 TTGGTAGACTT--ATCTT--CCAATA--TGCTAGCTTTAACAATAGTC-GTAG----TCT 170453 |||| | || ||||| || || ||||| || |||| || | ||| | | Sbjct 37755 TTGGGTGCGTTTAATCTTGCGCAGTAGCAGCTAG--TTTACAACAGACTCTAGAGGCTTT 37812 Query 170454 TCACTTCTTCCTTGCTACATTCCCTGTAGTATGCATCTGGTTAACTTCAATGGGTATTTG 170513 || ||||||||||| ||| |||| ||| | || |||||||| | | ||| ||| Sbjct 37813 ACATTTCTTCCTTGC-GCATGGCCTGAAGTTGGGATTTGGTTAACAGCTTTAGGT-GTTG 37870 Query 170514 CACAATGGCATTTAACCTTAATGGATTTAACTTCAACCAGTCAATCGTAGAT-GGATCTG 170572 || |||||||||||| | ||||| |||| ||| |||||||| | |||||| | | | Sbjct 37871 TACTATGGCATTTAACTTAAATGG-TTTAGCTTTAACCAGTCTGTTGTAGATAGTAGAAG 37929 Query 170573 GTAAAGTAGTTCCTACATGGGCAGACGTTCTTAACAGAGCAAACCT-AGGTATGGA 170627 || ||| | | |||||||| ||| | |||| | ||| | | ||||||||| Sbjct 37930 GTCGTGTATTAACGACATGGGCTGACAT--ATAACCGTGCAGATTTAAGGTATGGA 37983 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 582750904808800