Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharina_20japonica_20[genbank_20GCA_5F000978595.1_202015-04-22] 13,327 sequences; 543,425,876 total letters Query= NC_016656.1 Length=45890 Score E Sequences producing significant alignments: (Bits) Value seq2386 134 4e-27 >seq2386 Length=46605 Score = 134 bits (148), Expect = 4e-27 Identities = 384/548 (70%), Gaps = 47/548 (9%) Strand=Plus/Plus Query 26210 GCAGCTCTCGCAGTGTTCTTAGTTTATCCTTTCGGA-CAAGGG-AGTTTTAG-TGATGGA 26266 |||||||| || || |||| | |||| |||| |||| ||| || ||||| | ||| || Sbjct 37434 GCAGCTCT-GCGGTATTCTAA-TTTACCCTT-CGGATCAATGGTAGTTTCTGCTGACGGT 37490 Query 26267 ATGCCTCTTGGTATC--TCTGGTA-CTTTTAACTTTATGTTCG-TATTCCAA--GCA-GA 26319 |||| | |||||| ||||||| | |||||||| ||| ||| | |||||| || || Sbjct 37491 ATGCTTTATGGTATTGTTCTGGTAGCATTTAACTTCATGATCGGTTTTCCAAAAGCTCGA 37550 Query 26320 ACATAATATACTCATGCACCC--ATTCCATA-TGGCTGGTGTTGCTGGG-GTTTTCGGTG 26375 |||||| | | ||||||| |||||||| |||||||||||||||| ||||||| || Sbjct 37551 ACATAACTTT-TAATGCACCTGGATTCCATAATGGCTGGTGTTGCTGGATGTTTTCG-TG 37608 Query 26376 GAGCTCTTTTCGCTGCTAT-GCACGGAAGTTTGGTTACTTCCTCACTTATTGCAGAAACG 26434 | | | || |||||| ||| || || || ||| | || |||||| Sbjct 37609 GTTATTATATCAGTGCTATCGCATGGTTCTTCTAGTAATTCAAGTTTAATACGTGAAACG 37668 Query 26435 ACAGAGGAAGTCTCA-CAGA-ATTATGGCTATAAGTTTGGG-CA-AGAT-GAAGAGACAT 26489 | || | |||| | | | | || || || || || || || |||| ||||| || | Sbjct 37669 A-AGTG-AAGTTGAATCTGTTAATACGGTTACAAAATTCGGACAGAGATAGAAGAAACTT 37726 Query 26490 ATAATATTGTCGCTGCACACGGGT-ACTTTGGGAGA--TTAATTTTTC--AGTAT--GCG 26542 | || ||||| |||||||| ||| |||||||| | ||||| || | |||| || Sbjct 37727 ACAACATTGTAGCTGCACATAGGTTACTTTGGGTGCGTTTAATCTTGCGCAGTAGCAGCT 37786 Query 26543 AGTTTTAATAACAGCCGTT-----CTCTTCATTTCTTTCTTGCTACTTGGCCGGTTGTTG 26597 ||||| | ||||| | | || | |||||||| ||||| | ||||| | |||| Sbjct 37787 AGTTT--ACAACAGACTCTAGAGGCTTTACATTTCTTCCTTGCG-CATGGCCTGAAGTTG 37843 Query 26598 GCATATGGCTGACATCTATGGGTATCTGCACAATGGCATTTAACCTAAATGGTTTTAACT 26657 | || ||| | ||| || | ||| | || || |||||||||||| ||||||| |||| || Sbjct 37844 GGATTTGGTTAACAGCTTTAGGTGT-TGTACTATGGCATTTAACTTAAATGG-TTTAGCT 37901 Query 26658 TTAACCAGTCAGTAGTAGAT-GTTAATGGAAAGATAATACCTACATGGGCTGATGTATTA 26716 |||||||||| || |||||| || | || || || | ||||||||||| ||| Sbjct 37902 TTAACCAGTCTGTTGTAGATAGTAGAAGGTCGTGTATTAACGACATGGGCTGACATAT-- 37959 Query 26717 AACCGAGC 26724 ||||| || Sbjct 37960 AACCGTGC 37967 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 146703179355048