Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharina_20japonica_20[genbank_20GCA_5F000978595.1_202015-04-22] 13,327 sequences; 543,425,876 total letters Query= NC_016657.1 Length=47055 Score E Sequences producing significant alignments: (Bits) Value seq2386 105 2e-18 >seq2386 Length=46605 Score = 105 bits (116), Expect = 2e-18 Identities = 483/717 (67%), Gaps = 57/717 (8%) Strand=Plus/Minus Query 36018 TCCATGCCT-AAGTCGGCACGGTTAAGAATGTCAGCCCAAGTTGGGACGACTCTTCCGT- 36075 ||||| ||| || || ||||||||| ||||||||||| || | | || | || | Sbjct 37983 TCCATACCTTAAATCTGCACGGTTAT--ATGTCAGCCCATGTCGTTAATACACGACCTTC 37926 Query 36076 TGGAATCAACGACTGACTGATTGAAGTTAAAGCCGTTGAGATTAAAAGCCATAGTGGAGA 36135 | ||| || || ||||| || ||| |||| | || || ||||| |||||||| | | Sbjct 37925 TACTATCTACAACAGACTGGTTAAAGCTAAACCATTTAAG-TTAAATGCCATAGTACA-A 37868 Query 36136 CTCCCATAGCGGTAAGCCATATGCAAGTGACGGGCCAAGCAGCCAGGAAGAAATGTAAA- 36194 | || | ||| || | ||| || | | | ||||| || || ||||||||||||||| Sbjct 37867 CACCTAAAGCTGTTAACCAAATCCCAACTTCAGGCCATGC-GCAAGGAAGAAATGTAAAG 37809 Query 36195 -CT---GCGGCTATTATTAAAGCTAGC--ATACT--GGAAGAT--GAGTCTCCCAAAGTA 36244 || | | || || | || ||||| |||| | ||||| | | ||||||||| Sbjct 37808 CCTCTAGAGTCTGTTGT--AAACTAGCTGCTACTGCGCAAGATTAAACGCACCCAAAGTA 37751 Query 36245 GCC-ATGAGCCGCAACAATGTTATACGTCTCTTCT-TCT-TGGCCGAA-TTTATATCCAT 36300 || ||| || || |||||||| || || |||||| ||| || ||||| ||| || || | Sbjct 37750 ACCTATGTGCAGCTACAATGTTGTAAGTTTCTTCTATCTCTGTCCGAATTTTGTAACCGT 37691 Query 36301 AGTTCTGAGATTCAAGCCCAGTT-GTTTCACGAATAAGTGAGGAAGTA--ACAAGACTTC 36357 | || |||||||| || || |||||||| || | ||| || | |||| | Sbjct 37690 A-TTAACAGATTCAACTTCACTTCGTTTCACGTATTAAACTTGAATTACTAGAAGA--AC 37634 Query 36358 CGTGC-ATAGCAGCGAATAAAGCTCCACCGAATAC-CCCTGCAACACCGAGCA-TATGGA 36414 | ||| |||||| || || ||| |||| || || |||||||| || |||||| Sbjct 37633 CATGCGATAGCACTGATATAATAACCA-CGAAAACATCCAGCAACACCAGCCATTATGGA 37575 Query 36415 A--CGGATGCATAAGGATATTGTGTTCTGCCT----GAAAGACAAACATAAAATTGAAAG 36468 | | | ||||| | | || ||||| || |||| | | ||| || || || | Sbjct 37574 ATCCAGGTGCATTA-AAAGTTATGTTCGAGCTTTTGGAAAACCGATCATGAAGTTAAATG 37516 Query 36469 -TCCCTGA--AATACCAAGAGGCATACCATCAG-AGAAACT-CCCTTGTCCAAAAGGGTA 36523 | || || ||||||| | ||||||| |||| ||||||| || ||| | ||||||| Sbjct 37515 CTACCAGAACAATACCATAAAGCATACCGTCAGCAGAAACTACCATTGATCCGAAGGGTA 37456 Query 36524 GACTAAGAATACAGCAAATGCTGCTG-CAACAGGGGCTGAATAAGCTAC-ACATATCCAC 36581 | | ||||||| ||| | ||||||| | || | | || | ||||| | | || || Sbjct 37455 -AATTAGAATACCGCAGA-GCTGCTGTCTAC-TTGACAGAGAATGCTACGAAACAT-CAA 37400 Query 36582 GGCCTCATACCT--AGTCTATAACTAAG-TTCCCATTGTCGTCCCAAGTAAGCTGAGATA 36638 || | ||||||| | | || ||||| |||||||| || |||| || || | Sbjct 37399 GGACGCATACCTAAACACCGTAGCTAAGTTTCCCATTCACGACCCATCCAACAAGAAGCA 37340 Query 36639 CCAATGAGAAAGTGGAACACAATGAGTTGATATGGTCCTCCGTT-ATATAACCACTC 36694 ||||| | || ||||| || || | ||| || || || || || |||||||| || Sbjct 37339 CCAATTAAGAAATGGAATACGATTAATTGGTAAGG-CCACCATTGGTATAACCATTC 37284 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 150430589368758