Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharina_20japonica_20[genbank_20GCA_5F000978595.1_202015-04-22] 13,327 sequences; 543,425,876 total letters Query= NC_016659.1 Length=47536 Score E Sequences producing significant alignments: (Bits) Value seq2386 100 9e-17 >seq2386 Length=46605 Score = 100 bits (110), Expect = 9e-17 Identities = 385/566 (68%), Gaps = 48/566 (8%) Strand=Plus/Minus Query 25498 TCCATGCCT-AAGTCGGCACGGTTAAGAATGTCAGCCCAAGTTGGGACGACTCTTCCGT- 25555 ||||| ||| || || ||||||||| ||||||||||| || | | || | || | Sbjct 37983 TCCATACCTTAAATCTGCACGGTTAT--ATGTCAGCCCATGTCGTTAATACACGACCTTC 37926 Query 25556 TGGAATCAACGACTGACTGATTGAAGTTAAAGCCGTTGAGATTAAAAGCCATAGTGGAGA 25615 | ||| || || ||||| || ||| |||| | || || ||||| |||||||| | | Sbjct 37925 TACTATCTACAACAGACTGGTTAAAGCTAAACCATTTAAG-TTAAATGCCATAGTACA-A 37868 Query 25616 CTCCCATAGCGGTAAGCCATATGCAAGTGACGGGCCAAGCAGCCAGGAAGAAATGTAAA- 25674 | || | ||| || | ||| || | | | ||||| || || ||||||||||||||| Sbjct 37867 CACCTAAAGCTGTTAACCAAATCCCAACTTCAGGCCATGC-GCAAGGAAGAAATGTAAAG 37809 Query 25675 ---CTA-CGGCTATTATTAAAGCTAGC--ATACT--GGAAGAT--GAGTCTCCCAAAGTA 25724 ||| | || || | || ||||| |||| | ||||| | | ||||||||| Sbjct 37808 CCTCTAGAGTCTGTTGT--AAACTAGCTGCTACTGCGCAAGATTAAACGCACCCAAAGTA 37751 Query 25725 GCC-ATGAGCCGCAACAATGTTATACGTCTCTTCT-TCT-TGGCCGAA-TTTATATCCAT 25780 || ||| || || |||||||| || || |||||| ||| || ||||| ||| || || | Sbjct 37750 ACCTATGTGCAGCTACAATGTTGTAAGTTTCTTCTATCTCTGTCCGAATTTTGTAACCGT 37691 Query 25781 AGTTCTGAGATTCAAGCCCAGTT-GTTTCACGAATAAGTGAGGAAGTA--ACAAGACTTC 25837 | || |||||||| || || |||||||| || | ||| || | |||| | Sbjct 37690 A-TTAACAGATTCAACTTCACTTCGTTTCACGTATTAAACTTGAATTACTAGAAGA--AC 37634 Query 25838 CGTGC-ATAGCAGCGAATAAAGCTCCACCGAATAC-CCCTGCAACACCGAGCA-TATGGA 25894 | ||| |||||| || || ||| |||| || || |||||||| || |||||| Sbjct 37633 CATGCGATAGCACTGATATAATAACCA-CGAAAACATCCAGCAACACCAGCCATTATGGA 37575 Query 25895 A--CGGATGCATAAGGATATTGTGTTCTGCCT----GAAAGACAAACATAAAATTGAAAG 25948 | | | ||||| | | || ||||| || |||| | | ||| || || || | Sbjct 37574 ATCCAGGTGCATTA-AAAGTTATGTTCGAGCTTTTGGAAAACCGATCATGAAGTTAAATG 37516 Query 25949 -TCCCTGA--AATACCAAGAGGCATACCATCAG-AGAAACT-CCCTTGTCCAAAAGGGTA 26003 | || || ||||||| | ||||||| |||| ||||||| || ||| | ||||||| Sbjct 37515 CTACCAGAACAATACCATAAAGCATACCGTCAGCAGAAACTACCATTGATCCGAAGGGTA 37456 Query 26004 GACTAAGAATACAGCAAATGCTGCTG 26029 | | ||||||| ||| | ||||||| Sbjct 37455 -AATTAGAATACCGCAGA-GCTGCTG 37432 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 151969545777852