Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharina_20japonica_20[genbank_20GCA_5F000978595.1_202015-04-22] 13,327 sequences; 543,425,876 total letters Query= NC_016762.1 Length=49135 Score E Sequences producing significant alignments: (Bits) Value seq12292 141 3e-29 >seq12292 Length=560 Score = 141 bits (156), Expect = 3e-29 Identities = 185/256 (72%), Gaps = 0/256 (0%) Strand=Plus/Plus Query 21258 AGGACGTCAGCGACATGTCCCGCCAGTGCAAGCTGCTGGCGATGGAGCTTGGTATCCCCG 21317 |||| |||||| ||| ||||| | |||||||||||||| |||||| | || Sbjct 39 AGGAGGTCAGCAGCATCTCCCGAAACCTCAAGCTGCTGGCGAAGGAGCTCCAGCTGCCGA 98 Query 21318 TGATCGTGCTGTCGCAGCTCAACCGCTCCCTGGAGCAGCGGCCGAACAAGCGACCGATGA 21377 | ||| |||| ||||||||||||||| | ||| |||| | ||||||| ||| | Sbjct 99 TCATCCTGCTCTCGCAGCTCAACCGCGGGCCGGAAATGCGGGCAGACAAGCGGCCGCAGG 158 Query 21378 TGTCGGACCTGCGCGAGTCCGGGGCGATCGAGCAGGACGCCGATGTGATCATGTTCGTGT 21437 | |||||||| || |||||||| |||||||||||||||| || || |||| || ||| Sbjct 159 TCTCGGACCTTCGTGAGTCCGGCTCGATCGAGCAGGACGCGGACATGGTCATCCTCCTGT 218 Query 21438 ACCGCGACGAGGTCTACCACCCGGATACCCAGTACCGCGGCGTGGCTGAGTTGATCATCG 21497 |||||||||| | |||| | ||| | || | ||||| || || | || ||| Sbjct 219 ACCGCGACGACGCCTACGAGAAGGAAAGCCCGAGGGCCGGCGAGGTCGACATCATTGTCG 278 Query 21498 CGAAGCACCGCAACGG 21513 |||||||||||||| Sbjct 279 GCAAGCACCGCAACGG 294 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 157085536002678