Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharina_20japonica_20[genbank_20GCA_5F000978595.1_202015-04-22] 13,327 sequences; 543,425,876 total letters Query= NC_017940.1 Length=127732 Score E Sequences producing significant alignments: (Bits) Value seq731 127 2e-24 >seq731 Length=224370 Score = 127 bits (140), Expect = 2e-24 Identities = 160/217 (74%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 29878 ACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGTACCCCGAGC 29937 || ||||||| || ||| || || | |||| |||||||| || || ||||| | Sbjct 89586 ACCTGAGCCACCAGCCGCGTCAGCAGCGCGTAGGATGCGATGTTGAACGGCACCCCCAAG 89527 Query 29938 CCCATGTCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTCCGT-CGCTCACGTAAAA 29996 |||||||| | | |||||| | ||| ||||| |||||||||| ||| |||||| || Sbjct 89526 CCCATGTCGGCGCTTCGCTGGTACATCTGGCACGACAGCTCTCCGTTCGC-CACGTAGAA 89468 Query 29997 CTGACACATGGTGTGGCACGGAGGAAGAGCCATGAGGCCCAAGTCTTTGGGGTTCCAGGC 30056 ||| || | |||||||||| || || ||||| ||| | ||| || ||||||||||| Sbjct 89467 CTGGCAGAACATGTGGCACGGGGGCAGGGCCATCTTGCCGAGGTCCTTCGGGTTCCAGGC 89408 Query 30057 GCACACGATGATGCGCCTGTCTTCTGGGTTGTTCCTG 30093 | | | ||||||||||||||| ||||| ||||| Sbjct 89407 CGAGAGCACGATGCGCCTGTCTTCGGGGTTCGTCCTG 89371 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 408551231180171