Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharina_20japonica_20[genbank_20GCA_5F000978595.1_202015-04-22] 13,327 sequences; 543,425,876 total letters Query= NC_017974.1 Length=149273 Score E Sequences producing significant alignments: (Bits) Value seq5299 86.0 6e-12 >seq5299 Length=5339 Score = 86.0 bits (94), Expect = 6e-12 Identities = 105/141 (74%), Gaps = 2/141 (1%) Strand=Plus/Plus Query 107226 CCGTTACGGATGCCCAGCAGTTCCTCTGCG-TCCGGGCGGCGAACGATTACCTGCCCCGT 107284 |||| ||||| ||||||| || || ||| |||| ||||| ||| |||| || || Sbjct 10 CCGTCGCGGATCGCCAGCAGCTCTTC-GCGATCCGAACGGCGCACGTGCACCTCGCCGGT 68 Query 107285 TTCAAGGATTTCCTGTCCCATGCGGAGAAGGCGGACCAAGTGCATGGCGTGTTTGGTGTC 107344 ||||| || || |||||||| | | || |||| ||||| |||||| |||||||| Sbjct 69 GGACAGGATCTCGTGGCCCATGCGCATCAACCGCACCAGGTGCAGGGCGTGCTTGGTGTC 128 Query 107345 GTAACCGAACTTCTCCTCCAG 107365 ||| ||||||||| |||| || Sbjct 129 GTAGCCGAACTTCGCCTCGAG 149 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 477466046872360