Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharina_20japonica_20[genbank_20GCA_5F000978595.1_202015-04-22] 13,327 sequences; 543,425,876 total letters Query= NC_019401.1 Length=358663 Score E Sequences producing significant alignments: (Bits) Value seq9480 98.7 2e-15 seq4107 93.3 1e-13 seq7981 87.8 4e-12 >seq9480 Length=859 Score = 98.7 bits (108), Expect = 2e-15 Identities = 68/77 (88%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 324515 GGGGCTATAGCTCAGTTGGGAGAGCGTCTGCCTTGCACGTAGAAGGTCAACGGTTCGAAC 324574 |||||| ||||||||||||||||||| |||||||||||| || |||||| |||||||| | Sbjct 688 GGGGCTGTAGCTCAGTTGGGAGAGCGCCTGCCTTGCACGCAGGAGGTCAGCGGTTCGATC 629 Query 324575 CCGTTTAGCTCCACAAA 324591 ||| | |||||||| || Sbjct 628 CCGCTCAGCTCCACCAA 612 >seq4107 Length=10989 Score = 93.3 bits (102), Expect = 1e-13 Identities = 65/74 (88%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 324515 GGGGCTATAGCTCAGTTGGGAGAGCGTCTGCCTTGCACGTAGAAGGTCAACGGTTCGAAC 324574 ||||||||||||||| |||||||||| |||||||||||| || ||||| |||||||| | Sbjct 8820 GGGGCTATAGCTCAGCTGGGAGAGCGCCTGCCTTGCACGCAGGAGGTCCGCGGTTCGATC 8761 Query 324575 CCGTTTAGCTCCAC 324588 ||| ||||||||| Sbjct 8760 CCGCGTAGCTCCAC 8747 >seq7981 Length=1306 Score = 87.8 bits (96), Expect = 4e-12 Identities = 68/81 (84%), Gaps = 0/81 (0%) Strand=Plus/Minus Query 324511 ATATGGGGCTATAGCTCAGTTGGGAGAGCGTCTGCCTTGCACGTAGAAGGTCAACGGTTC 324570 || |||||| ||||||||| |||||||||| |||||||||||| || ||||| |||||| Sbjct 1155 ATTTGGGGCCATAGCTCAGCTGGGAGAGCGCCTGCCTTGCACGCAGGAGGTCGGCGGTTC 1096 Query 324571 GAACCCGTTTAGCTCCACAAA 324591 || |||| | ||||||| || Sbjct 1095 GATCCCGCCTGGCTCCACCAA 1075 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1147394446428846