Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharina_20japonica_20[genbank_20GCA_5F000978595.1_202015-04-22] 13,327 sequences; 543,425,876 total letters Query= NC_019443.1 Length=172879 Score E Sequences producing significant alignments: (Bits) Value seq2386 145 8e-30 >seq2386 Length=46605 Score = 145 bits (160), Expect = 8e-30 Identities = 407/577 (71%), Gaps = 47/577 (8%) Strand=Plus/Plus Query 162832 GGTCGTCAGTGGGAA-CTTTCTTACCGC--TTAGGTATGCGTCCTTGGATCTGT-GTTGC 162887 |||||| | |||||| ||| ||| | ||||||||||||||||| || | | || || Sbjct 37356 GGTCGTGAATGGGAAACTTAGCTACGGTGTTTAGGTATGCGTCCTTG-ATGTTTCGTAGC 37414 Query 162888 ATACTCTGCACCAGTAT-CTGCAGCATTCGCTGTGTTCTTGGTCTATCCTTTCGGTCAA- 162945 || ||||| | |||| | ||||| | || || |||| | || |||| | |||| Sbjct 37415 ATTCTCTGT-CAAGTAGACAGCAGCTCT-GCGGTATTCTAATT-TACCCTTCGGATCAAT 37471 Query 162946 GGTTCTTTCT-CTGACGCAATGCCTCTTGGTATT--TCTGGTA-CTTTTAACTACATGTT 163001 ||| ||||| |||||| |||| | ||||||| ||||||| | ||||||| |||| | Sbjct 37472 GGTAGTTTCTGCTGACGGTATGCTTTATGGTATTGTTCTGGTAGCATTTAACTTCATGAT 37531 Query 163002 CG-TGTTCCAA--GCA-GAGCACAACATCCTAATGCACCCC--TTCCATA-TGATTGGAG 163054 || | |||||| || || || ||| | ||||||||| ||||||| || ||| | Sbjct 37532 CGGTTTTCCAAAAGCTCGAACATAACTTT-TAATGCACCTGGATTCCATAATGGCTGGTG 37590 Query 163055 TCGCAGG-TGTATTCGGTGGTTCACTCTTT-AGTGCTAT-GCACGGTTCTCTTGTTACTT 163111 | || || ||| |||| ||||| | | | | |||||||| ||| |||||| | || || Sbjct 37591 TTGCTGGATGTTTTCG-TGGTT-ATTATATCAGTGCTATCGCATGGTTCTTCTAGTAATT 37648 Query 163112 CTTCTCTTATCAGAGAAACTAC-TGAGCAAGAGTCACAGAACTACGGTTATAAG-TTCGG 163169 | | | || | ||||| | ||| || || || |||||||| || ||||| Sbjct 37649 CAAGTTTAATACGTGAAACGAAGTGAAGTTGAATCTGTTAA-TACGGTTACAAAATTCGG 37707 Query 163170 ACA-AGA-AGAAGAGACTTACAACATTGTTGCTGCTCAT-GGATACTTTGG--TCGCTTG 163224 ||| ||| |||||| |||||||||||||| ||||| ||| || |||||||| || || Sbjct 37708 ACAGAGATAGAAGAAACTTACAACATTGTAGCTGCACATAGGTTACTTTGGGTGCGTTTA 37767 Query 163225 ATCTT--CCAGTATGCATC----TTTCAACA-ACTC-ACGTTCACTTCACTTCTTCCTTG 163276 ||||| ||||| ||| | || ||||| |||| | | | || |||||||||| Sbjct 37768 ATCTTGCGCAGTA-GCAGCTAGTTTACAACAGACTCTAGAGGCTTTACATTTCTTCCTTG 37826 Query 163277 CTGCATTCCCTGTGGTCTGCATCTGGTTCACTGCAATGGGTGTGTCAACTATGGCATTCA 163336 | |||| |||| || | || ||||| || || | ||||| | ||||||||||| | Sbjct 37827 C-GCATGGCCTGAAGTTGGGATTTGGTTAACAGCTTTAGGTGT-TGTACTATGGCATTTA 37884 Query 163337 ACCTTAACGGTTTCAACTTCAACCAATCCGTCGTTGA 163373 || | || ||||| | ||| ||||| || || || || Sbjct 37885 ACTTAAATGGTTT-AGCTTTAACCAGTCTGTTGTAGA 37920 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 552992662985880